| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0328 |
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| Symbol | |
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| ID | 7268429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 408294 |
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| End bp | 409997 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643565196 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002461710 |
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| Protein GI | 219847277 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.106742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCTG AACGTTTACA GAAAGTATTG GCGAGTGCCG GGATCGCATC GCGGCGCGAT
TGTGAAGAAC TCATTGCTGC TGGGCGAGTA ACGGTAAATG GCCGCGTCGT GACTGTGCCC
GGTACGCGCG TCGACCTTGA GCATGATGAA GTGTTGGTTG ATGGGCAACC GCTGCGGATG
CCGGCCAAGC GCACCTATAT TATGCTACAC AAGCCGGCAG GGGTGGTTTC GACAGCGGAA
GATCCTCATG GTCGTCCCAC AGTTGTCGAC TTGGTCGATG TCCCGGCACG TGTTTTTCCG
GTAGGACGGC TTGATCTGGA TAGCGAAGGT TTGATCTTGC TGACCGATGA TGGCGAGTTG
GCCTATGCCC TGACGCATCC GAGTTTTGAG GTCGAGAAAG AGTACCGGGT ATTACTTGAT
CGAGCATTAA CGCCCGATGC ATTGCGGAGT TGGCGTAATG GTGTGCTGCT CGAAGGTGAG
ATGACCGCAC CGGCATGGGT TGAATTGCTT GAGACAACTC CTGAAGGTGT GTGGGTGCGG
ATTGTGTTGC GAGAAGGGCG CAAACGCCAA ATCCGCGCTG TCGCCAAGCT CTTGGGCTAT
GAAGTGCGTC GTCTGGTTCG GGTGCGTGAA GGTCCGCTAC AGCTCGGTGA TTTGCCGCCA
CGTGCGTGGC GTCATTTGAC CGATGAAGAA GTAGCTGCAC TTCGCGCACA TGTTTCGGTG
CGTCGATCGT TAGCGGATGT GCCAACCAGA TCGACCGATG TAGTGAAGTC TCGCGCTCTT
GATGAAAAAC CTCACCGTGC CGGGGACTCA GCGCCGGTAA CGCGGCAGCG ATCTGAGCAC
AGCGAACGTC GGAGCAGTGA CCGTTCGCGT CGGGAACAAC GTGACGAACG TGTCACAGAA
GGTCCAACGT GGGGCGAGAC GGACGCCCGC GCCGGTCGGG CACCGCGTGG CCGGCAAGAC
AGCCGCGGCG AGGCGGGGCG TGGGGCGTGG GGCGAGACGG ACGCCCGCGC CGGTCGGGCA
CCGCGTGGCC GGCAAGACAG CCGCGGCGAG GCGGGGCGTG GGGCGTGGGG CGAGACGGAC
GCCCGCGCCG GTCGGGCACC GCGTGGCCGG CAAGACAGCC GCGGCGAGGC GGGGCGTGGG
GCGTGGGGCG AGACGGACGC CCGCGCCGGT CGGGCACCGC GTGGCCGGCA AGACAGCCGC
GGCGAGGCGG GGCGTGGGGC GTGGGGCGAG ACGGACGCCC GCGCCGGTCG GGCACCGCGT
GGCCGGCAAG ATAGCCGCGG TGAGGCGGGG CGTGGGGCGT GGGGCGAGAC GGACGCCCGC
GCCGGTCGGG CACCGCGTGG CCGGCAAGAC AGCCGCGGTG AGGCGGGGCG TGGGGCGTGG
GGCGAGACGG ACGCCCGCGC CGGTCGGGCA CCGCGTGGCC GGCAAGACAG CCGCGGCGAG
GCGGGGCGTG GGGCGTGGGA CGAGACGGAC GCCCGCGCCG GTCGGGCACC GCGTGGCCGG
CAAGACGAAC GGCGCAATAC CGAGCGGAAT CCGCGAAATT GGGATAATGC AGCGCAGTCA
CGTTCTGAAC ACCGCTCGCC AACGTCACAC CGTGATACTC CGAAAACGTC GGTGAGACGC
ACAAATCAAT CGGAGCGAAA GCCATCAAGT GTACACCGTT CAGATCCAGA TCAGAAGACT
CGCAGTAATG CAGATCAAGA ATAA
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| Protein sequence | MSPERLQKVL ASAGIASRRD CEELIAAGRV TVNGRVVTVP GTRVDLEHDE VLVDGQPLRM
PAKRTYIMLH KPAGVVSTAE DPHGRPTVVD LVDVPARVFP VGRLDLDSEG LILLTDDGEL
AYALTHPSFE VEKEYRVLLD RALTPDALRS WRNGVLLEGE MTAPAWVELL ETTPEGVWVR
IVLREGRKRQ IRAVAKLLGY EVRRLVRVRE GPLQLGDLPP RAWRHLTDEE VAALRAHVSV
RRSLADVPTR STDVVKSRAL DEKPHRAGDS APVTRQRSEH SERRSSDRSR REQRDERVTE
GPTWGETDAR AGRAPRGRQD SRGEAGRGAW GETDARAGRA PRGRQDSRGE AGRGAWGETD
ARAGRAPRGR QDSRGEAGRG AWGETDARAG RAPRGRQDSR GEAGRGAWGE TDARAGRAPR
GRQDSRGEAG RGAWGETDAR AGRAPRGRQD SRGEAGRGAW GETDARAGRA PRGRQDSRGE
AGRGAWDETD ARAGRAPRGR QDERRNTERN PRNWDNAAQS RSEHRSPTSH RDTPKTSVRR
TNQSERKPSS VHRSDPDQKT RSNADQE
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