| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0307 |
|---|
| Symbol | |
|---|
| ID | 7267488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 384079 |
|---|
| End bp | 384750 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643565175 |
|---|
| Product | Ribulose-phosphate 3-epimerase |
|---|
| Protein accession | YP_002461689 |
|---|
| Protein GI | 219847256 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
|---|
| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTAG CACCCTCCAT CCTCACGGCA GATTTCTCTC GTCTAGGTGA ACAGGTCGCC
ACGGCATGCG AGACGGGAAT CGATTGGATT CACCTCGATG TTATGGACGG CCAATTTGTT
CCCAATATTA GTTTTGGGCC GCCGGTGGTG CGCTCGTTGC GCCCGTTGGC CGACCGATAC
GGCGCACTCC TCGATGCGCA TCTGATGATT GTTGAGCCGG AGCGTTATCT CGCCGATTTT
GCCGCCGCCG GCGCCGATCT CATAACCGTG CATGTCGAAG CCACCCCGCA CGTTCATCGG
GCTATCCAGA TGATCCACGA TCTAGGCAAA AAGGCCGGTG TCGCCCTGAA TCCGGCAACA
CCGCTCAGTA TGGTCGAAGA GGTCATTGAT CAGGTTGAAT TGATCCTACT CATGACGGTT
AATCCCGGTT TTGGTGGGCA AACGCTGATC CCTTCGGTGT TGGCGAAAGT ACGGCGGTTG
GCAACCATGC TCGGTGATCG TCCGGTGGAG ATTATGGTTG ACGGCGGTGT GCATCCGGCG
ACGATAGCCG CTTGCGCTGC GTCCGGTGCA ACAGTAGCGG TTGTCGGTTC GGCTGTCTTC
GGTGAACAGC CGATCCCGGC GGCGATTGCC GCACTTCGGA CGGCGCTCGC CGATTCGGTG
CAGACACGCT GA
|
|---|
| Protein sequence | MRLAPSILTA DFSRLGEQVA TACETGIDWI HLDVMDGQFV PNISFGPPVV RSLRPLADRY
GALLDAHLMI VEPERYLADF AAAGADLITV HVEATPHVHR AIQMIHDLGK KAGVALNPAT
PLSMVEEVID QVELILLMTV NPGFGGQTLI PSVLAKVRRL ATMLGDRPVE IMVDGGVHPA
TIAACAASGA TVAVVGSAVF GEQPIPAAIA ALRTALADSV QTR
|
|---|
| |