Gene Cagg_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0274 
Symbol 
ID7267455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp345342 
End bp346448 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content56% 
IMG OID643565144 
ProductABC transporter related 
Protein accessionYP_002461658 
Protein GI219847225 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.533134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCAA TCAAGTACGA TCACGTGTGG AAGCGGTTCG GTGAAGTAAC CGTCCTCAAG 
AATCTCGACC TTGACATTGC CGACGGGGAG TTTCTCGTAC TGGTCGGACC ATCGGGTTGT
GGGAAGTCTA CAGCGTTACG TTGTCTGGCC GGCCTGGAAG AGGTGACCGA AGGCCGTATC
TTCATCGGCG ACCGTGATGT CACCGACATT CCACCCAAAG ATCGCGACAT CGCAATGGTA
TTCCAGTCAT ACGCTCTCTA CCCACACATG AGCGTGTATG ACAACATGGC ATTTGGTCTC
AAGCTGCGCC GCGTCCCAAA GGCAGAAATC GACCGGCGGG TGAAAGAGGC AGCCGAGATG
CTCAGTATCG CCCACTTGCT CGACCGCAAG CCGAAAGCAC TATCCGGCGG TCAACGTCAG
CGAGTCGCGC TTGGCCGGGC CATTGTGCGC GACCCGGCCG TCTTCTTGAT GGACGAGCCG
CTCTCGAACC TTGACGCCAA GCTGCGCGTG CAAACTCGTG CCGAGATCAG CAAGCTCCAC
CAACGCCTCA AGACTACCTT CATCTACGTA ACCCACGACC AGACCGAAGC GATGACGATG
GGTTCGCGCA TTGCGGTGAT GCGTGATGGG ATTTTGCAGC AGATCGATAC ACCGCAGAAT
CTGTACGATC ATCCGGCGAA TATGTTTGTC GCCGGTTTTA TCGGCAGCCC GGCAATGAAC
TTCTTCGAGG CACGGCTCGA ACGTACTGAC GGTGGGGTAA GTGTTGTGGT CGGGAAAGAG
TTTGTTTTAC CGGTACCACA GAGCAAGCTC GATCACGTGA GTAGTCATAT TGGCAAGACG
GTCTATTTCG GTATTCGCCC AGAAGACCTA CACGATGCCC ATTATGTGCC GCGTGGCGTG
GACGAGCGGG CGAAGGTGAA AGCATCGGTC AACGTGGTTG AGCCGATGGG GTCTGAAATC
TACGCCTACG TTGAGAATAG CGGCAAAGAA TTCATTGGCC GCTTTGATCC GCGCTCAACG
GCTCGGACCG GTCATACGAT CGAGGTCGTC TTCGATATGG AGAAGATGCA CATCTTCGAT
CGGGAGACTG AAAAGGCGTT GACGTAA
 
Protein sequence
MASIKYDHVW KRFGEVTVLK NLDLDIADGE FLVLVGPSGC GKSTALRCLA GLEEVTEGRI 
FIGDRDVTDI PPKDRDIAMV FQSYALYPHM SVYDNMAFGL KLRRVPKAEI DRRVKEAAEM
LSIAHLLDRK PKALSGGQRQ RVALGRAIVR DPAVFLMDEP LSNLDAKLRV QTRAEISKLH
QRLKTTFIYV THDQTEAMTM GSRIAVMRDG ILQQIDTPQN LYDHPANMFV AGFIGSPAMN
FFEARLERTD GGVSVVVGKE FVLPVPQSKL DHVSSHIGKT VYFGIRPEDL HDAHYVPRGV
DERAKVKASV NVVEPMGSEI YAYVENSGKE FIGRFDPRST ARTGHTIEVV FDMEKMHIFD
RETEKALT