Gene Cagg_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0194 
Symbol 
ID7269109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp242491 
End bp244122 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content52% 
IMG OID643565066 
Productconserved repeat domain protein 
Protein accessionYP_002461581 
Protein GI219847148 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5640] Secreted trypsin-like serine protease 
TIGRFAM ID[TIGR01451] conserved repeat domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTCTT CCCGGCTCAT TACACCGCTT ATTTTTGTCA TTACCCTCCT CACTCTTTTT 
CCGGTTACTG TCTCTTCCCA GCACGATTCA CAACCTGAAA TGAACGTCGT CGGTGGGACG
GAAGTTACGC CGGGTGAGTA TCCGTGGCTC GTTGCCTTGA TCGACGCTGC GATTACCGAT
GAAGCCTTCG CATTTTGCGG TGGTGCGCTC GTTGACGATG GTGGTGACTT TACCACCACA
GAGTGGGTGC TCACTGCTGC ACATTGCTTG GTAGATGCGA CCCCAACACA GATCGAGGTA
TTAGTTGGAC AAATCGATCT CTCGCAGGCA ACTGTGAGCC AGCGCAAGGC GGTTGATGAA
TTGATCATTC ACCCATTCTA CCTTGACGAC AATGCGCTCA TGAACGACAT CGCTTTGGTG
CGTTTGGCTA CGCCGGTTAG CGACATAACG CCGATCAAGA TTGCAACACC TGATGATGCA
GCACGGTTTG CACCAGGCGT GACGGCGCAA ATTGCGGGCT GGGGTAATCG ATCACCACAA
ATTGTTTCAG ATTTTCCGAG TGTTGCACAC AAGGCGGAGG TGTCATTGGT TGATCTAGCA
ACGTGCAATC AACGGTACGA TGATGCACTC AGTTCTATGC ACTTGTGCGC CGGTGCGTAT
CCTGAAGGTG CGGTTGATTC ATGCCAAGGT GATAGTGGTG GCCCGTTGAT GGTGCCCGAC
GGTGCAGGCG GTTTGCTGCA TGCCGGGATA GTGAGTTTTG GTGTTGGTTG CGCATGGCCC
TACTTCCCCG GTGTTTATGC GCGCACCGCC TTTTTCGCCG ATTGGATACA AAGCCAGATC
GATGAAACTG CTCATGTCGA TATTTGGCAA TTGCCGCTCA CCGAAGACGG TATACCGTCA
TACATTTCAA CCTCAGCGCC GAATACCCCA TTTACCTATA CGCTCTTCGT GGTGAACAGT
GGCCTCATCC CACTCACCGA TGTGCAAGTT ACGACGACAT TACCGTCAGG TGCCACACTG
ATAAGCGATA GCATCAGTGG TGGAGGTACG TATTCGGATA GCACAAGGAC AATTACCTGG
TCGCTCGCTA TGCTTGATCC AGGTGAGCTA TTGGAACTGA CCTATCAGGT ACAAGCGCCC
TCAAGCGTCA CATCTGGTAA TTACCAAGTT CAGGCCAATA GTAGTGATGG CCCGGTATTC
AGTACTGGGC GTGATCCGAT CAAGACATGG ATCGATGAAC CACGGTTCAT CATTCAGGCA
TTTTCCGAAC CTTTCGTCGA AGTGGGGACG AACTATCCGG TTGAATTTTA CATACAAAAT
CTGGGTAAGG GTCCCAACGC CGGAGCTTCC GCTCTCGGTC TTGTTGTTGA TCTCCCACCC
GATCTTACGG CCACCGTCAT TGATGACGGT GGCACCCAGA CCGGTAACCA GATACGCTGG
ACAATGACCG AGTTACCGCC CGAAACCCTT GTACGTACCA CTGTGTTCTT TACTGCCGGT
GAGGTTGGTG ATATAACGCG AATCTCTAAC ATCGGTCTCT ACAACGAATC AACGACCATT
CACTACGCTT CGTCAGCAGT GCAAGTTATC GTTGTCCCGG CTGTGCGCTA TCTACCGTTG
ATAAGTCGGT AA
 
Protein sequence
MYSSRLITPL IFVITLLTLF PVTVSSQHDS QPEMNVVGGT EVTPGEYPWL VALIDAAITD 
EAFAFCGGAL VDDGGDFTTT EWVLTAAHCL VDATPTQIEV LVGQIDLSQA TVSQRKAVDE
LIIHPFYLDD NALMNDIALV RLATPVSDIT PIKIATPDDA ARFAPGVTAQ IAGWGNRSPQ
IVSDFPSVAH KAEVSLVDLA TCNQRYDDAL SSMHLCAGAY PEGAVDSCQG DSGGPLMVPD
GAGGLLHAGI VSFGVGCAWP YFPGVYARTA FFADWIQSQI DETAHVDIWQ LPLTEDGIPS
YISTSAPNTP FTYTLFVVNS GLIPLTDVQV TTTLPSGATL ISDSISGGGT YSDSTRTITW
SLAMLDPGEL LELTYQVQAP SSVTSGNYQV QANSSDGPVF STGRDPIKTW IDEPRFIIQA
FSEPFVEVGT NYPVEFYIQN LGKGPNAGAS ALGLVVDLPP DLTATVIDDG GTQTGNQIRW
TMTELPPETL VRTTVFFTAG EVGDITRISN IGLYNESTTI HYASSAVQVI VVPAVRYLPL
ISR