| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0142 |
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| Symbol | |
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| ID | 7266881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 189495 |
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| End bp | 190985 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643565014 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_002461529 |
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| Protein GI | 219847096 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0300218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTTAT TCACCGGTCA ACGATTAGAG CGATCTGTGT GGTTATGGCT AGCCGCGGCT
GCCTTAGTTG GGGTTGGTAT TGCGCTCGTC CCACCACTCT TCGCCGTAAG CTGGCTCCTC
GGTCTGGCCG CGCTCGGTTT GGCGGTGTGT GATCCGATTT GGCCGGTAGC GCTGGCCGTG
CTCTCGGTAC CATTCCAGCA ATTGGTCACG CTGCCCGGTG GGCTGAGTGT GACCCAGTTC
TGTTTCATCC TGGTGGCCCT TAGCTTCCTC TGGCAATTGT CCCAACGACG GTGGCCCTGG
CCGGATATGC CGGGCATTGC TCTGGCCATT TTCCTTTGGA CACTCGCCGT GACCGCCGCT
TTGACACCAC TTAGCCGCAG TGAGGGACTA AAAGAGACAC TCCGTTGGGG AACAGTACTC
CTGATCTACC TTGCTGCAAT GAGTGCGCTG CAAGACCCTG ATCGAGTACA ATGGCGACGG
GCCGTACTCG TTGCCTGTTT GCTTGCTGCC CCGGCGATAA CGGCGTTGAT CGGTATTGGT
CAGCACCTGA CCGGAATCGG CCCGGCGAGT TTTGCCGTTG GAGACGGGCG GGTGCGCGCC
TATGGCACGA TTGGTCAACC AAACTCGTTT GCCGGCTACC TGAATCAGGC GTGGCCGTTG
GCAGCCGGTT TTGGCCTGGT GATGATCGTC ACACATCATT GGCACACCTG GCGCGACAGG
TTGCGCTTAG GCATCGTCTT CATCACGGCG GGTAGCTTGA TCGGTGGGTT ACTGGCGAGC
TTTTCGCGTG GCGGCTGGGT AGGAGCAGCA CTCGGTGCGA CGGTCATGAC GGTTGTGCTT
GGCGCCTGGT ACGGACGACG GATGCTGCGA CAGAGCATAC CGGTTATCCT TGTGGCAGTA
TTTGGGGGAA TGATCCTGGT GAATAGTGGG TTGCTACCGA CCGCGCTGAG TAGTCGGCTT
ACATCCATTA TCGCCAATCT CCAGCCGTTC GATGTGCGTA ATGTTAACAT CACACCGGAC
AACTTCGCAG TAGTCGAGCG AATGGCGCAC CTGCAAGCAG CGTGGAATAT GGTGCAAGAA
CGGCCGCTAT TGGGAGTAGG ACCGGGAAAT TTCACCATCG CCTACGAACG GCTGGTGTAT
AGTGGGCAAA CACCCACATG GATTAAACCA TGGTATGATT CTCGTGGTCA CGCTCACAAC
TACTACCTGC ACATCGCTGC CGAAAGTGGT TTGATCGGAT TGAGTGCGTA TCTGCTCTTG
CTAGGTAGCG TTTGGCGTAC TGCGGTGCGA GCAGTTCAAC AAGCGAACGA TTGGTTTACA
CGCGGTATCG CACTGGGTGG CATAGGAGTA GTGAGCACAC TGAGCGGTCA CAATCTCTTT
GAAAATCTGC ATGTTTTGAA TATGGGAGTG CAGTTTGCGG CAATCATTGC GCTTATCGCG
ACCATCAATA CCGGTCGCAC TGAACTGCAC AGTTGCAACG AGGACCTATG A
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| Protein sequence | MYLFTGQRLE RSVWLWLAAA ALVGVGIALV PPLFAVSWLL GLAALGLAVC DPIWPVALAV
LSVPFQQLVT LPGGLSVTQF CFILVALSFL WQLSQRRWPW PDMPGIALAI FLWTLAVTAA
LTPLSRSEGL KETLRWGTVL LIYLAAMSAL QDPDRVQWRR AVLVACLLAA PAITALIGIG
QHLTGIGPAS FAVGDGRVRA YGTIGQPNSF AGYLNQAWPL AAGFGLVMIV THHWHTWRDR
LRLGIVFITA GSLIGGLLAS FSRGGWVGAA LGATVMTVVL GAWYGRRMLR QSIPVILVAV
FGGMILVNSG LLPTALSSRL TSIIANLQPF DVRNVNITPD NFAVVERMAH LQAAWNMVQE
RPLLGVGPGN FTIAYERLVY SGQTPTWIKP WYDSRGHAHN YYLHIAAESG LIGLSAYLLL
LGSVWRTAVR AVQQANDWFT RGIALGGIGV VSTLSGHNLF ENLHVLNMGV QFAAIIALIA
TINTGRTELH SCNEDL
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