Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0112 |
Symbol | |
ID | 7266850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 156936 |
End bp | 157718 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643564984 |
Product | periplasmic binding protein |
Protein accession | YP_002461500 |
Protein GI | 219847067 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.16006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.195536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTTCA GTGATGCTCT CGGTCGTCAG TTTGAACTAC CTGCACCACC CCGCCGGATC ATCTCGCTGG TGCCAAGTAT GACCGAGTGG TTGTTCAGCG TTGGCGCCGG CGAGCGCGTG GTGGCTGTGA CCGACTATTG TGTCGAACCG GCGGCAGCAA TTGCCCATTT GCCACGGGTG CGTGGTACCA AAAATCCGGA TCGGGCAGCG ATTATTTCGC TCCAGCCCGA CCTGGTTATC GCCGAGCAAG AAGAAAACCG CGAACGTGAT GTGCGGGCAC TGTCTGAGGC CGGGATCAAT GTCTATGTCA CTGCTATTCG CAGTGTCGCC GATGCTGTTA AGCAATTGGC TGCTTTGGCT GCTGTGCTTG ACGTTACGCC GGCGGCAGCG CCGATGCTTG CAGCGATGGA GGCAGCGATT GCTGTGCCTC CTCCGCCAAC GCGACGGGTG CTGGCCTTGA TTTGGCGCGA TCCGTGGATG GCGGTCGGGC AAGCTACTTA CGCCGGTGAT GTGCTGCGTC TCAGTGGTGG GATCAATGTC GCCGCCGAGT TGCCCGGTCG CTATCCACGA GCCACGTTAG CCGAGTTTCT CGCATTCGAT CCAGAAGTCA TTCTGCTACC GAGCGAACCG TATCCGTTTA GCGAACGCGA TCTGCCGGCG TTTGCCGAGG TGACCGGACG TTGCCGTCTC GCTTTTTGTG ATGGAATGGC GCTGACATGG CCCGGCCCGC GCACGGTGAC GGCTCTGACA ACCTTCCGTC ATCTCCTCGA GGATGCGCTA TGA
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Protein sequence | MRFSDALGRQ FELPAPPRRI ISLVPSMTEW LFSVGAGERV VAVTDYCVEP AAAIAHLPRV RGTKNPDRAA IISLQPDLVI AEQEENRERD VRALSEAGIN VYVTAIRSVA DAVKQLAALA AVLDVTPAAA PMLAAMEAAI AVPPPPTRRV LALIWRDPWM AVGQATYAGD VLRLSGGINV AAELPGRYPR ATLAEFLAFD PEVILLPSEP YPFSERDLPA FAEVTGRCRL AFCDGMALTW PGPRTVTALT TFRHLLEDAL
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