Gene Cagg_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0112 
Symbol 
ID7266850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp156936 
End bp157718 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content60% 
IMG OID643564984 
Productperiplasmic binding protein 
Protein accessionYP_002461500 
Protein GI219847067 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.16006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.195536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCA GTGATGCTCT CGGTCGTCAG TTTGAACTAC CTGCACCACC CCGCCGGATC 
ATCTCGCTGG TGCCAAGTAT GACCGAGTGG TTGTTCAGCG TTGGCGCCGG CGAGCGCGTG
GTGGCTGTGA CCGACTATTG TGTCGAACCG GCGGCAGCAA TTGCCCATTT GCCACGGGTG
CGTGGTACCA AAAATCCGGA TCGGGCAGCG ATTATTTCGC TCCAGCCCGA CCTGGTTATC
GCCGAGCAAG AAGAAAACCG CGAACGTGAT GTGCGGGCAC TGTCTGAGGC CGGGATCAAT
GTCTATGTCA CTGCTATTCG CAGTGTCGCC GATGCTGTTA AGCAATTGGC TGCTTTGGCT
GCTGTGCTTG ACGTTACGCC GGCGGCAGCG CCGATGCTTG CAGCGATGGA GGCAGCGATT
GCTGTGCCTC CTCCGCCAAC GCGACGGGTG CTGGCCTTGA TTTGGCGCGA TCCGTGGATG
GCGGTCGGGC AAGCTACTTA CGCCGGTGAT GTGCTGCGTC TCAGTGGTGG GATCAATGTC
GCCGCCGAGT TGCCCGGTCG CTATCCACGA GCCACGTTAG CCGAGTTTCT CGCATTCGAT
CCAGAAGTCA TTCTGCTACC GAGCGAACCG TATCCGTTTA GCGAACGCGA TCTGCCGGCG
TTTGCCGAGG TGACCGGACG TTGCCGTCTC GCTTTTTGTG ATGGAATGGC GCTGACATGG
CCCGGCCCGC GCACGGTGAC GGCTCTGACA ACCTTCCGTC ATCTCCTCGA GGATGCGCTA
TGA
 
Protein sequence
MRFSDALGRQ FELPAPPRRI ISLVPSMTEW LFSVGAGERV VAVTDYCVEP AAAIAHLPRV 
RGTKNPDRAA IISLQPDLVI AEQEENRERD VRALSEAGIN VYVTAIRSVA DAVKQLAALA
AVLDVTPAAA PMLAAMEAAI AVPPPPTRRV LALIWRDPWM AVGQATYAGD VLRLSGGINV
AAELPGRYPR ATLAEFLAFD PEVILLPSEP YPFSERDLPA FAEVTGRCRL AFCDGMALTW
PGPRTVTALT TFRHLLEDAL