Gene Cagg_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0100 
Symbol 
ID7266838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp141878 
End bp143425 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content56% 
IMG OID643564973 
Productnicotinate phosphoribosyltransferase 
Protein accessionYP_002461489 
Protein GI219847056 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1488] Nicotinic acid phosphoribosyltransferase 
TIGRFAM ID[TIGR01513] putative nicotinate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00987122 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.985664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGCG CACAGCTCCG CACCGCCACC GGTATTCTCT TTACCGATCA ATACCAGTTG 
ACGATGGCCC AGCTCTATTT TCGCATGGGC ATCCACGAAC GCCTCGCCCA ATTCGATCAC
TTCTTCCGTC AGCCACCGAA CTACGGTTTG CACGCTGCCG GTTACTGTAT TGCCGCCGGG
CTAGAATGGT TGCTCGACTG GATGGAGACG GCATATTTCG GCCCAGCCGA GATCGAAGTA
TTACGTGGTC AACGTAACCG TGTTGGCAAG CCGATTTTTG GCGAGGACTT TCTCGCTTAT
CTGCGCGATA ACGGCAACTT TAGCGGGATC ACCATGTGGG CAGTGCCTGA AGGGCGTGTC
GTGCATGCGC AGGCGCCGAT GACTATCGTG CGTGGGCCGT TGCTTATGGC GCAGATTCTT
GAGACCGCGT TGCTCAACCA TCTCAATTAC CAGACGCTGG TAGCAACCAA AGCTAGCCGC
ATCCGCGAAG CAAGCGGTGC CAGTACGGTG CTCGAGTTTG GCTTACGGCG TGGGCAGGGT
TTGGGGGCAA ATGCCGGTAC ACGCGCAGCT TTGATCGGTG GTGCTGATTT TACCTCAAAT
GTCGGTCTGG CCTACACCAT CGGCCAAACC GCGAAAGGAA CCCATGCCCA TGCAATGGTG
CAGTCGTTCC TCGCTCTTGG TATGAGCGAA CTCGATGCCT TCCGTGCTTA TGCAGAGGTC
TACCCTGACG ATTGTCTGTT GCTTGTCGAT ACGATCGACA CGTTACAAAG CGGTGTGCCC
AACGCAATCC GCGTTTTTGA GGAGTTACGC GCCAAAGGTC ATAAACCGGT TGGGGTACGG
CTCGATTCGG GCGATCTTGC CTATCTCGCC ATCCAGACGG CCCTGATGCT CGATCAGGCC
GGTTTTCCCG ATACCGTAAT CGTCCTCTCG AACGATCTTG ATGAACTGGT GATCTGGCAA
ATTCAGAGCC AAATTGCCCA AGAAGCACGG CGTTACAACG CCGACGCCGA TGCGATCATT
CGGCGACTGG TGTACGGTGT CGGGACGCGG CTCGTTACTT CACACGGTGA AGGCGCTCTT
GGCGGAGTTT ATAAACTGGT AGCAGTCCAT GATGGTCAAA CGTGGCAACC GGCGATCAAA
ATCGCCGAGA GTGCAGTGAA ACTGACCAAT CCCGGTCTCA AGCGGGTTTG GCGTTTGTAC
GATGATCGGG GCAAAGCGAC CGCCGACCTG ATCGCACTCG AAGACGAAGA TCCGACGAGT
GAAGAGTATA TTCGCCTCCG TCACCCAACC GATCACACTC GTCAGCGGCT GCTCAAACGT
ACCGAGCTGA CCGGGATCGA GCCATTACTC GAACCGGCGA TGGTGAATGG GCAACGGGTA
GCCGAGCCGT TACCACTGGA GCAGATGCGG GCACGACGCC ATGCTGATGT TGAACGGCTC
GATCTCGGTG TTCGCCGAAT TATGAACCCG CACATTTACC ACGTCTCGCT TAGTCAACGT
TTGTGGGAAC TGAAGCAAGA GCTGCTGGCC CGCTTGCAAC AGGTCTAG
 
Protein sequence
MNGAQLRTAT GILFTDQYQL TMAQLYFRMG IHERLAQFDH FFRQPPNYGL HAAGYCIAAG 
LEWLLDWMET AYFGPAEIEV LRGQRNRVGK PIFGEDFLAY LRDNGNFSGI TMWAVPEGRV
VHAQAPMTIV RGPLLMAQIL ETALLNHLNY QTLVATKASR IREASGASTV LEFGLRRGQG
LGANAGTRAA LIGGADFTSN VGLAYTIGQT AKGTHAHAMV QSFLALGMSE LDAFRAYAEV
YPDDCLLLVD TIDTLQSGVP NAIRVFEELR AKGHKPVGVR LDSGDLAYLA IQTALMLDQA
GFPDTVIVLS NDLDELVIWQ IQSQIAQEAR RYNADADAII RRLVYGVGTR LVTSHGEGAL
GGVYKLVAVH DGQTWQPAIK IAESAVKLTN PGLKRVWRLY DDRGKATADL IALEDEDPTS
EEYIRLRHPT DHTRQRLLKR TELTGIEPLL EPAMVNGQRV AEPLPLEQMR ARRHADVERL
DLGVRRIMNP HIYHVSLSQR LWELKQELLA RLQQV