Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0029 |
Symbol | |
ID | 7269026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 45295 |
End bp | 46794 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643564902 |
Product | putative GAF sensor protein |
Protein accession | YP_002461418 |
Protein GI | 219846985 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2203] FOG: GAF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGATA CTGAAGACCT TGCCGCTCTG ACCGTTGCTG AACTGGTAGA ACAAGTACGC GAATTACGCG CTGCCAATGC CCAATTACGC CGACAGTTGC ATCCCGTCGG TCCACCGCTC GCTGCGCACG CATTGGCCGG TGAACTCATC CGACAAACCG CACTGCTTGC CCGTCTCGGT ATCGAGTTTC GTGACGATCT CGAACCAATG GGGTTGATCC AGCAGACCTT GCAGGCGGTG ACCGTTGACT TGCCCGCCGA TGAGGCAACG GTTGTATTGA TCGGTCCCGA TCGGCAACCA TCCCAAGCCT TGACCGTAGC TCTCGGTGCG CCACGTCTGC TGCCACCTGA GCGCGCAGCC GAACTGATCG GTCAGGGGAG TGCCGGTTGG GCGTTGCGTC AAGGTAGCAG TATTGTCCTC CTCGATCTAG CCAACGACGT GCGACGCTTC CAGCTCCGTG AATTACAAAC CGGCGGCAGT CTGATTGCTA CACCAATCCG ACAACCTACA GCCACTACCG GCGTCTTGAT CGTCTACCGT CTGGCGACGA ATGCGTTTAG CAGTAACGAA CTGATCTTGA TCGAAAGCAT TGCTACCCAA CTGAGCGTCG CACTCGGTGC CGTACAGCTA TCACAGCAGT ATCGTCTCCG CCAACATCGA TTTCTCAACT TGCTCAACCT CGGTCAGTTG GCTACTGCCG GCCATACTGT CGGTGACGTT GCTGCACGAT GTTATACAAT CGCTATCGAA ACGTTCGCTG CGCGCTGGGG TTTGCTGTTC TTGTATCCGG CGCCGCAAGC ACCGCTCGCT TGGATTGAAC CGGCTAACCT TGCCGTCGAT GTCCCGATAA CTGCTATCGG TGGCGCCGCT CAGCTTGCTG CCGAGAGTCA ACATGTTGTG ACCGTTGCGC TGGGTGATGA CGTGACCTGT CTTGCCTTAC CGTTGACCCA CGATGGTACG ACAATTGGCG GCCTGGCACT TGGGTTTACC GGTCAGCGTC CATCACCCGG TGGTCTCGAT TGGAACCTGC TCGAATTGTT TGCCAGCCAG ACTGCAACGG TCTGTGCAAC CTTACAATTG GTGCAACGGC TACACGAACA GGCGCAACTC CTCGAAGAAC TGGTTACCGA GCGTACCGAT CAATTGCAAC GTTCGCGTGA CGTGTTACGC ATGGTGTTTG ACAGCTTACC GGAAGGCGTG GTCTTACTCG ATGAAAGCGA GCGACTGGCC GCCGTCAATA CGGTCTTCGC GAACCAAATC GTCGGTCGCC ATCCTCGTGA TCTGGTTGGC AAGACGTATG CTCACCTCTT GCGTATGATC GAGCGGGCTG CGCCAACAAC GATCGAATTG GTGCCCGAGG CTCGTTCCGG TCGCCAGCAA TTACGACTGC GACAGCGGTT AGCCGACGGT GAACGCAGCT TTCTGATCGA ACGAATGGGG ATACCGTCTT CACAAGGTCA GCCGGCGTCG CGGCTTGAAT TTTGGCGACG CGAGTCGTAA
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Protein sequence | MPDTEDLAAL TVAELVEQVR ELRAANAQLR RQLHPVGPPL AAHALAGELI RQTALLARLG IEFRDDLEPM GLIQQTLQAV TVDLPADEAT VVLIGPDRQP SQALTVALGA PRLLPPERAA ELIGQGSAGW ALRQGSSIVL LDLANDVRRF QLRELQTGGS LIATPIRQPT ATTGVLIVYR LATNAFSSNE LILIESIATQ LSVALGAVQL SQQYRLRQHR FLNLLNLGQL ATAGHTVGDV AARCYTIAIE TFAARWGLLF LYPAPQAPLA WIEPANLAVD VPITAIGGAA QLAAESQHVV TVALGDDVTC LALPLTHDGT TIGGLALGFT GQRPSPGGLD WNLLELFASQ TATVCATLQL VQRLHEQAQL LEELVTERTD QLQRSRDVLR MVFDSLPEGV VLLDESERLA AVNTVFANQI VGRHPRDLVG KTYAHLLRMI ERAAPTTIEL VPEARSGRQQ LRLRQRLADG ERSFLIERMG IPSSQGQPAS RLEFWRRES
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