| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0019 |
|---|
| Symbol | |
|---|
| ID | 7269016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 29765 |
|---|
| End bp | 30901 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643564892 |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_002461408 |
|---|
| Protein GI | 219846975 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA CATGCATGCA AGATGATCTG AAGCGCGGTT TGGCGGCGAT AAGCCATGCC
GTTGCCGGTA AAAGCGCAAC ATTGCCGGTA TTGGCGAATG TGTTACTTGC TACTGATAAT
GGCCGGCTCA AACTGACAGC CACCAATCTT GAGGTCGGAA TTAATCGTTG GATTGGTGCG
AACATAGCGC AAGCAGGGGC AGTGGCTGTT CCGGCCAAGC TGTTGGCCGA TGTCGTGGGT
GGTCTACCGA ACGATACCGT AACCCTCACT CTCGATCCCA AGACCCAAAC GTTGCGGGTT
GAATGTGGCC GCTTCGTAAG CAATATCAAA GGCGTTGATG CAGACGAATT TCCTTCATTG
CCGGCTGTAA ATACGCGGGC GCCGCTCGTG TCGTTGCCGG CGGTGCTCTG GCGTGAGGCT
ATTGAACAGG TAGCGTTTGC CGCCGCGACC GATGAGTCGC GCCCGATTTT GACCGGTGTG
TTGGTCCGAA CGCGCGATCG GCAATTGACG CTCGTGGCCG CCGATGGCTT TCGGCTGGCA
ATGCGTACAA TTCCGTTGGC CGAAACGGTT GCGCACGCGG TCGATTGCTT AATTCCGGCA
CGCATGCTCG CCGAGTTGGC CCGCATTATC GGCGATATTG AGGGTGATGT GGCGATGGTG
TACACACCCG GTGGTAGTCA TGTTCTCTTC CACACTGAAA ATACCGAGGT TGTCTCACGT
TTAATCGAGG GAAGGTTCCC TGATTTTGAG CGGATCATTC CGCAACAATA TCTGACGCGA
ACGGTGCTCG ATAGTACTGA GTTGGCAAAA GCAGTGAAGC TTGCATCGTT CTTCGCCAGT
GCGAGCCAAA ATGTGGTCAA ATTAAAGATC GAGCCGGCCG GTGAGATGGG GCCGGGGAGG
ATTGTGCTGA GTGCCAATTC CGCCGAATTG GGTGACAATA CGAGTGAGCT AGACGGGAGC
GTCACCGGTG ACGGTGGGGT CATTGCGCTC AATGTTAAGT TTTTGGCCGA TGCGATTGCT
GCGGTTGGTT CAAACCAAAT CGCGTTTGAA ATGCAGAGTG CGCAAAGCCC TGCGGTGTTT
AAGCCGGTGG GGCACGATGG CTATATTCAC ATCGTGATGC CGATGAGTAT GCGATAA
|
|---|
| Protein sequence | MKLTCMQDDL KRGLAAISHA VAGKSATLPV LANVLLATDN GRLKLTATNL EVGINRWIGA
NIAQAGAVAV PAKLLADVVG GLPNDTVTLT LDPKTQTLRV ECGRFVSNIK GVDADEFPSL
PAVNTRAPLV SLPAVLWREA IEQVAFAAAT DESRPILTGV LVRTRDRQLT LVAADGFRLA
MRTIPLAETV AHAVDCLIPA RMLAELARII GDIEGDVAMV YTPGGSHVLF HTENTEVVSR
LIEGRFPDFE RIIPQQYLTR TVLDSTELAK AVKLASFFAS ASQNVVKLKI EPAGEMGPGR
IVLSANSAEL GDNTSELDGS VTGDGGVIAL NVKFLADAIA AVGSNQIAFE MQSAQSPAVF
KPVGHDGYIH IVMPMSMR
|
|---|
| |