| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0009 |
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| Symbol | |
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| ID | 7269005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 8352 |
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| End bp | 9077 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643564881 |
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| Product | ABC transporter related |
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| Protein accession | YP_002461398 |
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| Protein GI | 219846965 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.788883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00117724 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACACCAC CTCTGATTCA ACTGAACAAT ATTACGAAAG TCTATGTCAT GGGCGAGACG
GAAGTACACG CTTTACGCGG CATATCGCTT ACCATCAACC AAGGGGAGAT GGTAGCGATT
ATGGGACCGT CGGGGAGCGG CAAGAGTACG TTGATGAACA TCATCGGCTG TCTCGACCGG
CCAACGTCAG GTGAATACTT GCTGGAAGGG GTGAATGTTG GTGAACTGAG TGACGATGAG
CTGGCGATCA TCCGTAATGA GAAGATCGGC TTTGTGTTTC AGCAGTACAT GCTGTTACAA
CGAACTACCG CTCTGCGAAA TGTCGAGCTG CCGATGCTGT ACGGACGGGG ACGGCCAGAT
CGACAAGAGC GGGCACGGCG CGCTTTGGAA GCGGTGGGTA TGGGAGACCG ACTGCACCAC
CGGCCCAATG AGCTGTCAGG TGGGCAACAA CAGCGCGTGG CGATTGCGCG AGCATTGGTC
AATGAGCCGC GAATCATTAT GGCCGATGAG CCGACCGGTG CGCTTGACTC ACGTACCGGC
GCCGAGATCA TGGGTATTTT TCAGCGGCTC AATGCTGAAC AGGGCATCAC CGTCATTCTC
GTGACACACG AGCACGATGT AGCTCAACAC GCCGAGCGGA TTATTAGCGT GCGAGATGGT
CTGATCGCCG ATGACCGACC GGTAACGAAC CGCACGATTG CGTGGCGTGA GCTGGCAACA
GGATGA
|
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| Protein sequence | MTPPLIQLNN ITKVYVMGET EVHALRGISL TINQGEMVAI MGPSGSGKST LMNIIGCLDR
PTSGEYLLEG VNVGELSDDE LAIIRNEKIG FVFQQYMLLQ RTTALRNVEL PMLYGRGRPD
RQERARRALE AVGMGDRLHH RPNELSGGQQ QRVAIARALV NEPRIIMADE PTGALDSRTG
AEIMGIFQRL NAEQGITVIL VTHEHDVAQH AERIISVRDG LIADDRPVTN RTIAWRELAT
G
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