Gene Cagg_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0005 
Symbol 
ID7269001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp5441 
End bp6976 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content54% 
IMG OID643564877 
Producthypothetical protein 
Protein accessionYP_002461394 
Protein GI219846961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.833945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000456917 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAATGG ACAACAATTC CCAACTAATC GCCGCTATTA CTGCCATCGT GACTGCGTTG 
CAGAATCAGG CTCAGGTTGA TGCTTCCTTG CGTCATCATC TGCGGGTGCT CGGTGAAGCA
CTGCTGGCAA TGGCCGACGA TGCATCTGCC ACAGCGGTGT CCGAGCCGGT ACAGCTCGAA
TACGACGAGC CATCTGCATC TGCGACCGTT GCCGGCGAGG AAGCGGTTGC CACCGCACCT
GAATTACCAC AGGCCACCTT ACCACGCGCT ACCGAAGCAG ATTTATTACG CTTAGTCGAT
CACTTTTCCG GGAATAAAGC CCACGTACCT CCCCCCGCAC CGGTCGCGAA GTCGGCACCC
ACAGATGCTA ATGAGGTGGA GCTGCTCACC AACCTTAGTA CGTGTTTATT TAACAAGGCT
GCGTATATCA GGCAAGTGCT TGACGAACCG GAATCGGCAC TCGACAAAAC TGAACCGTGT
ACGGCGTGGA TTGTCAATCA ACTCAAACAA ACGCTTACAA AACGACGCGA CGATTGGGCG
GTGTTGGCCG GTTCGTGCGA AGTGGCAGCT ATCGTTGTTG ATGCGCTCAG TGAAATCGTT
GACAATCCGT CCTTCAAACA GGAGCTGAAG GAAGGGTTAG CCCTTGCCGC TGAAGCTCAA
TCGGCGCTAT TTGTGGCAGT TCAACGGTTG CGTAAGAAAC CCGATCCGAC GCAATTACAG
CTCTTTGAGT GGTTGCAACG GCGTACTAAG CAAGATGGTA TCTACCTTGA GCGCTATATG
CGACGTGCCG ATCAGGCCGA TCCGACCCAA TGGCAAACAC GACGAGCACG GGTGGAAGAA
TGGCGTGCGG CCCTTGATCA GGCGATCTAT CGCCGCCGGC GGCAACGTAA ACTCCTAAAT
AAATTGCGTT ATCAGCTCGA TCAAGTTCAA CGCGGTGACG ATGAGCAGTG GCCTAAGGCG
CTCCAAACAG TTATCACCCT GGTTGATCTT GGCATACCGC CGAGTGATCG TACCCTGCGC
CGCTTACTCC TCCCATTTCG TGAACGACTG CATACGGTAA GCGAGGAGGC GCGTCAGTTG
GCGTGGGTTG TGCGTGAGTT AGACCGTGCC GCGCCGGCGT TGCCTGATGA TGAAGAGGGG
GCAGTTATCG AAGAGGTTCG TGATAACCCA TTGGTGAAGC AGGTGGCTGA GCTGTTGCAG
AACAAAAGCG TCGTCTTGAT CGGTGGTGAT GAGCGCCCGC AGATCAAACA GATGATCGAG
GAAGAGTTCA AGCTACGTGA ACTGATCTGG TGTGATACGC GACCGCATCA TAGTTATGTC
TTCACCGAAC CATCCATTGC CCGGCCAGAA GTCGCCGTGG TCTTGCTTGC CATCCGCTGG
GCCAGTCACG GGTTAGGTTC CGTCAAAGAC TTTTGTGATC GATACAATAA ACCACTGGTC
CGCCTACCCG CCGGCTACAG TGTGAGTCAG ATTGCCTACC AAATCTGGGA GCAAGCGAGT
AGCCGCCTCC GCGATGGTTT AAGTGCAGAT AGATAA
 
Protein sequence
MQMDNNSQLI AAITAIVTAL QNQAQVDASL RHHLRVLGEA LLAMADDASA TAVSEPVQLE 
YDEPSASATV AGEEAVATAP ELPQATLPRA TEADLLRLVD HFSGNKAHVP PPAPVAKSAP
TDANEVELLT NLSTCLFNKA AYIRQVLDEP ESALDKTEPC TAWIVNQLKQ TLTKRRDDWA
VLAGSCEVAA IVVDALSEIV DNPSFKQELK EGLALAAEAQ SALFVAVQRL RKKPDPTQLQ
LFEWLQRRTK QDGIYLERYM RRADQADPTQ WQTRRARVEE WRAALDQAIY RRRRQRKLLN
KLRYQLDQVQ RGDDEQWPKA LQTVITLVDL GIPPSDRTLR RLLLPFRERL HTVSEEARQL
AWVVRELDRA APALPDDEEG AVIEEVRDNP LVKQVAELLQ NKSVVLIGGD ERPQIKQMIE
EEFKLRELIW CDTRPHHSYV FTEPSIARPE VAVVLLAIRW ASHGLGSVKD FCDRYNKPLV
RLPAGYSVSQ IAYQIWEQAS SRLRDGLSAD R