Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0005 |
Symbol | |
ID | 7269001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 5441 |
End bp | 6976 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643564877 |
Product | hypothetical protein |
Protein accession | YP_002461394 |
Protein GI | 219846961 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.833945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000456917 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAATGG ACAACAATTC CCAACTAATC GCCGCTATTA CTGCCATCGT GACTGCGTTG CAGAATCAGG CTCAGGTTGA TGCTTCCTTG CGTCATCATC TGCGGGTGCT CGGTGAAGCA CTGCTGGCAA TGGCCGACGA TGCATCTGCC ACAGCGGTGT CCGAGCCGGT ACAGCTCGAA TACGACGAGC CATCTGCATC TGCGACCGTT GCCGGCGAGG AAGCGGTTGC CACCGCACCT GAATTACCAC AGGCCACCTT ACCACGCGCT ACCGAAGCAG ATTTATTACG CTTAGTCGAT CACTTTTCCG GGAATAAAGC CCACGTACCT CCCCCCGCAC CGGTCGCGAA GTCGGCACCC ACAGATGCTA ATGAGGTGGA GCTGCTCACC AACCTTAGTA CGTGTTTATT TAACAAGGCT GCGTATATCA GGCAAGTGCT TGACGAACCG GAATCGGCAC TCGACAAAAC TGAACCGTGT ACGGCGTGGA TTGTCAATCA ACTCAAACAA ACGCTTACAA AACGACGCGA CGATTGGGCG GTGTTGGCCG GTTCGTGCGA AGTGGCAGCT ATCGTTGTTG ATGCGCTCAG TGAAATCGTT GACAATCCGT CCTTCAAACA GGAGCTGAAG GAAGGGTTAG CCCTTGCCGC TGAAGCTCAA TCGGCGCTAT TTGTGGCAGT TCAACGGTTG CGTAAGAAAC CCGATCCGAC GCAATTACAG CTCTTTGAGT GGTTGCAACG GCGTACTAAG CAAGATGGTA TCTACCTTGA GCGCTATATG CGACGTGCCG ATCAGGCCGA TCCGACCCAA TGGCAAACAC GACGAGCACG GGTGGAAGAA TGGCGTGCGG CCCTTGATCA GGCGATCTAT CGCCGCCGGC GGCAACGTAA ACTCCTAAAT AAATTGCGTT ATCAGCTCGA TCAAGTTCAA CGCGGTGACG ATGAGCAGTG GCCTAAGGCG CTCCAAACAG TTATCACCCT GGTTGATCTT GGCATACCGC CGAGTGATCG TACCCTGCGC CGCTTACTCC TCCCATTTCG TGAACGACTG CATACGGTAA GCGAGGAGGC GCGTCAGTTG GCGTGGGTTG TGCGTGAGTT AGACCGTGCC GCGCCGGCGT TGCCTGATGA TGAAGAGGGG GCAGTTATCG AAGAGGTTCG TGATAACCCA TTGGTGAAGC AGGTGGCTGA GCTGTTGCAG AACAAAAGCG TCGTCTTGAT CGGTGGTGAT GAGCGCCCGC AGATCAAACA GATGATCGAG GAAGAGTTCA AGCTACGTGA ACTGATCTGG TGTGATACGC GACCGCATCA TAGTTATGTC TTCACCGAAC CATCCATTGC CCGGCCAGAA GTCGCCGTGG TCTTGCTTGC CATCCGCTGG GCCAGTCACG GGTTAGGTTC CGTCAAAGAC TTTTGTGATC GATACAATAA ACCACTGGTC CGCCTACCCG CCGGCTACAG TGTGAGTCAG ATTGCCTACC AAATCTGGGA GCAAGCGAGT AGCCGCCTCC GCGATGGTTT AAGTGCAGAT AGATAA
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Protein sequence | MQMDNNSQLI AAITAIVTAL QNQAQVDASL RHHLRVLGEA LLAMADDASA TAVSEPVQLE YDEPSASATV AGEEAVATAP ELPQATLPRA TEADLLRLVD HFSGNKAHVP PPAPVAKSAP TDANEVELLT NLSTCLFNKA AYIRQVLDEP ESALDKTEPC TAWIVNQLKQ TLTKRRDDWA VLAGSCEVAA IVVDALSEIV DNPSFKQELK EGLALAAEAQ SALFVAVQRL RKKPDPTQLQ LFEWLQRRTK QDGIYLERYM RRADQADPTQ WQTRRARVEE WRAALDQAIY RRRRQRKLLN KLRYQLDQVQ RGDDEQWPKA LQTVITLVDL GIPPSDRTLR RLLLPFRERL HTVSEEARQL AWVVRELDRA APALPDDEEG AVIEEVRDNP LVKQVAELLQ NKSVVLIGGD ERPQIKQMIE EEFKLRELIW CDTRPHHSYV FTEPSIARPE VAVVLLAIRW ASHGLGSVKD FCDRYNKPLV RLPAGYSVSQ IAYQIWEQAS SRLRDGLSAD R
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