| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1988 |
|---|
| Symbol | |
|---|
| ID | 3747367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2523442 |
|---|
| End bp | 2524794 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637774525 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_380279 |
|---|
| Protein GI | 78189941 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4198] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGT GGCATTGCAA GGCTTTTCTT ATTTTGCGCC ACTCTTTTAA CGAACAGTGC
AACCTTTTTA TGCCCGAAAT AAAACCCTTT TCAGGGGTGC TCTACCATCC TGAATTATTG
AAGCAAGCAG ACAAACTAAT CTGCCCTCCT TACGATATTA TCTCCTCAGC CCAGCAGCAA
TCGCTGTACC ATCGTTCCCC ACTGAATGCT ATTCGCCTTG AATTGCCACT TGAGGAGAAT
CCTTACGGAA CTGCCGCTGC ACGTTTAACG CAATGGCTTC AGTCGGGCGA ACTTCAGCGC
GATAGTGAGC CGGCGATCTA TCCTTACTTT CAAACTTTTG AGGATTTAGA GGGCAAGAGC
CATGTGCGCC ATGGATTTTT TACCGCAATG CGTTTGCATG AGTTTTCGGA AAATAAGGTG
CTACGCCACG AAAAAACCCT ATCGGCACCA AAAGCTGATC GCTTGAACCT TTTTCGGGCA
ACGCGCACCA ACATTAGTCC TATTTATGGC TTGTATGCCG ATGAGCATCG CACGCTTGAC
CAACTTATGG TGGCGTACAG CGAAACGCAC GAGCCACTGC TTGATGCCAA TGTGCAAGGC
ATACGCAATC GCTTGTGGCG CATTACTGAG CCTACGCTTT TAGAGCAATT CCGCCAAACC
TTGCTTAATC GCCAAGTTTA CATTGCCGAT GGGCACCATC GTTACGATAC GGGCGTTACC
TACCGCAACG AGCGTATGGC AGCAAATCCT ACCCATAATG GCAATGAGCC GTATAACTTT
ATTTTTAGCT GCCTTACCAA TATTTACGAT GAAGGCTTAA TTGTTTTTCC GCTGCATCGC
GTGCTGCATA GTGTGGCTGA TTTTAATGCC GAGCGTCTTA AAGAGCAGCT TGCGGAATTT
TTTACCATTA CTGACCTCAA TAGCCAAGAT GAATTGAAAG CCTATCTTGC GGCATCTACC
TCATCATTTA GTTATGGCGT GGTAACGAGT GGTGCGCTGT ATGGTATGAC GCTTAAAGGT
GAAGCGGCAC CGTTGCTTGA TGCCCAGTGT GCCCATTGCC CCGAAGCGGT AGCGCAACTT
GGTGTGGTGG TGTTGCATCA GGTGATTTTT CATAAGCTGC TTGGCATTTC GCATGAAGCT
ATGGAAGCTC AGCGCAATTT GCTTTATGTT ACCGATGTGA ATGAGGTGTT TCATGCCGTT
GCCTGCCGCA CCGCTCAAGC GGGCTTTGTG GTAAAGCCCA CCACGGTGCA GCAAGTGCTT
GACGTGTCGG AATCGGGCGA GGTGATGCCG CAAAAGTCCA CCTTCTTCTA TCCAAAGCTT
ATGACGGGCT TGCTCTTTAA CCCGCTTGAT TAA
|
|---|
| Protein sequence | MMQWHCKAFL ILRHSFNEQC NLFMPEIKPF SGVLYHPELL KQADKLICPP YDIISSAQQQ
SLYHRSPLNA IRLELPLEEN PYGTAAARLT QWLQSGELQR DSEPAIYPYF QTFEDLEGKS
HVRHGFFTAM RLHEFSENKV LRHEKTLSAP KADRLNLFRA TRTNISPIYG LYADEHRTLD
QLMVAYSETH EPLLDANVQG IRNRLWRITE PTLLEQFRQT LLNRQVYIAD GHHRYDTGVT
YRNERMAANP THNGNEPYNF IFSCLTNIYD EGLIVFPLHR VLHSVADFNA ERLKEQLAEF
FTITDLNSQD ELKAYLAAST SSFSYGVVTS GALYGMTLKG EAAPLLDAQC AHCPEAVAQL
GVVVLHQVIF HKLLGISHEA MEAQRNLLYV TDVNEVFHAV ACRTAQAGFV VKPTTVQQVL
DVSESGEVMP QKSTFFYPKL MTGLLFNPLD
|
|---|
| |