| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1919 |
|---|
| Symbol | |
|---|
| ID | 3747294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2436941 |
|---|
| End bp | 2441521 |
|---|
| Gene Length | 4581 bp |
|---|
| Protein Length | 1526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637774454 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_380210 |
|---|
| Protein GI | 78189872 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02059] cyanobacterial long protein repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.369591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT TTATTACGCT CAGTAATCCA AGCTATAGCT ACAATGCCTC TAAGGGAAAA
ACAACAGTAC AGTTTGATAT TTGTTTCGCA TCAAATGAAA TGGCAGGCTC TAAAATAACG
GGAGCAAAAA TTGACCTTCA GTATAATACG TCACTTGTAA CTGCATATCA GATAACTAAT
CCAACATTTT CGTTTGAAGG TGATTTTGGA ACAGAAACAG CATCAGTTTG GGTAGCAGCT
TTTGATCAAA CTGCAAATTT AACGGGTAGT GGTGCTACAG GTCAAATAGC CATGTTGGCG
ACTAGTAATG ATGCCAATCC AATTATAGTA AATGGTAAAG TGCTTACGGT TACTTTAAGC
GTTACAGGTG AAGTTAATGC GGATACCTTT GCTATTACGT TACAAAAAAC AGCAGATGGT
GGTAATAACA GTATTTCAAA TGCTACGACA GAATATTTTC TTGATGGTGG TACTTATGTA
GCACCCCCAA CAAGTTTAGC TGACGTTACC GTTGACCTGC ATGTAAATAG CGATACCGGT
ACCTCAAATA CTGATAATCT GACCAATGAT GATACTCCAA CAGTAACGGT TAACTTGACC
GGTAAATCGT TATCTGAGGG TCAAACACTT CAAATTATTG ACACATCAAA TAGTAATGCC
GTTGTTGGTA CTTATACGAT TACTTCGACT GACGCAACCA ACGGTATTAC AACAAAAGAT
GTTACGCTTA GCACCTTGAC AAGTGGGGCT CACGCGCTTA AAGCACAACT AAATGCTGGT
TCGACGGCTG GTACCCCAAG TGCAACAGCT ACAACGGTAA CCATTGATAC TACCGCACCA
ACAAGTTTAG CAGACGTGCC TGTGGATTTA AAAAGTTCAA GCGATAGTGG TTTAAGTACC
GATAATATTA CTAATGCGAC AACTCCTGTA ATAACTGTTA ATCTGACGGG AAAAACTCTT
GTTGCTGGTG ATATTGTACA GGTTATAGAT ACGAGTAATG GAAATGCTGT TGTTGGTTCT
TATACTGTTA CCACTGGCGG TACAGGTTCA TCATTAGATA TTACGTTAAC GACTCCATTA
AGCTTAGGTG CTCATGCCCT CAAAGCTCAA TTAGTGGATG TAGCCGGTAA TGTTGGAACT
GCAAGTACTA ATGCTTTAAC TGTTACTGTT GATACCACTG CACCAACGGC TCCAACGTTA
GCGCTAGCAA CAGATAGTGG TAGCAGCAAT AGCGATGGTA TTACCAATGT TGGTACGGTC
AATGTTACAG GCATAGAAAC GAATGCAACG TGGCAATACA GCACGAATGG TGGAACAAAT
TGGAGTAATG GTACGGGCAC AAGTTTTACG TTAGCTGCCG CAACTTATGC GGTTGATGCA
ATTCGAGTTC GTCAGACAGA TGTAGCCGGC AATGTGAGCG GTGAAGGTAA AATTGCAACA
GCAGTAACCA TTGATAGCTC TGCACCGGTA GCACCCACGT TAGCATTTAC CGATGCCGGT
ACAAGTACAA CCGATGGACA TACCAGCAAT AATACGATTA CGGTTACCGG TATCGAAAGC
AACGCAACGT GGCAATACAG TACGAATGGT GGTACAAATT GGAGTAATGG TACTGGCACA
AGCTTTACTA TAGTTGATGG CACTTACAAT GCTAACACTA TTAAGGTAAA GCAAACGGAT
GTAGCTGGTA ATGTAAGTGG CGAAGGTTCT CTTGCCCCAG CAATTACCGT TGATACAGTA
CGTCCCACAG TCACTGTTAC TCCAGTAACA ACGGCGTTAT CTGCTCAGGG TACGACTACC
ATTACCATGA CTATGAGCGA AGCCGTTACA GGATTCGCTG CTGATGATAT CAAAACATCA
TCAAAATATT CGATTTCCAA TTTTAGTGCT ACTTCATCAA CAGTTTATAC TGCTACATAC
ACAGCTAATG AGGCAACTAC TGATGTAGCA AAAGAGCTAA AATTCGAGAC AAATTGGACT
GACGCTGCTG GTAACCAACC AAAATTTGGT CCAACTGTTG ATATTACCTT AAACGACGCT
GCATTAAAAA TCGGCGAAAC AGCTACAGTA ACCTTTACAT TTAGTGAAGT TCCAACTGGT
TTTGATTCAA GCGATATATC GGTAACCAAC GCCAATGGTC AGCTTAGCGG TTTAGCAGTA
AAATCAGGTT CAAATGGTTT AGTGTATGAA GCAACATTTA CTCCTACAGC TAATGTTACA
AGTGCAACAA ATAAGATTAC CGTAGGAAAA GATTGGACAA ATGCAGAAGG GGTCGCTCCA
ACGAATGATA CAACTGATTC CCCCAATTAT GCGGTAGATA CATTCCGTCC CACAGCCACC
ATTGTTGTAG CAGATATAGC CTTAAAAGCG GGAGAAACAT CATTAGTTAC TATTACTTTC
AGTGAAGCAG TTAGCGGTTT TGATAACGCT GATCTCACCA TCCAGAATGG AACTCTTACG
AATGTTGCAT CGTCTGACGG AGGCATTACA TGGTCAGCAA CACTAACACC AACGGCAGAT
ATTTCTGATA CAACAAACGT TATCACGTTA GCCAATACCG GTGTCAATGA TGTTGCCGGG
AATGCAGGTA CGGGTACAAC GGATTCTAAT AATTATGCGA TAGATACAGC TCGTCCTACG
GCCACCATTG TTGTAGCTGA TACAGCACTC AAGGCAGGAG AAACATCCGC AGTTACCATT
ACCTTTAGTG AAGCTGTTAC AGGATTTGAT AACAGTGATC TTACCATTGC AAATGGTACA
CTCACCCCTG TAGCGTCAAG TGATGGAGGA ATAACATGGA CAGCAACGTT AACGCCAACC
ACAAATCTTG AAGATGCCAC CAATGTTATC ACTGTCAATA AAGCAGGAGT AACCGATGCC
GCCGGTAATG CCGGAGTTAG CACAACGGAT TCCAATAATT ACACAATCGA CACTCAAGCT
CCGGCAGCGC CAACTTTATC AATCACAGAT AATGGACAGA GTACATCGGA TAATCTTACT
AACAATGGAA CGGTAACTGT AAGCGGTCTT GAAACCGGTG CAACATGGCA GTATAGCACA
AATGGCGGTA CTAACTGGAC GACTGGTTCA GGCACAAGTT TCACGTTAGG AGCTGGAACG
TATGCAGCAA ATAACATTCA GGTAAAGCAA ACCGATGCAG CAGGAAACGT TGGTATTGTT
GGTCAAATTA CCTCACAGGT TGATGTTGAT AAGGTTGCAC CTACTTTAAA AAGTGTTGTT
GTAAATGGTA CATCTGTAGT AATCACCTAT AATGAAGCGC TTGATGCCAC CAATAAGCCA
GCAACAACTG ATTTTACTGT ATCCAATAAT ACAGTTAACA ATGTGGCTGT TGATTCGACA
GCTAAAACCG TTACGTTAAC GCTTGGAACA ACAGTCGTAT CAGGGGCAGA TGTAACTGTA
AGTTACGCTG ATCCAACCAC TGTAGATGAT AGCAACGCTA TTCAAGATGT TGCGGGCAAT
GATGCGGCTA AGTTTACCAC AACTATAAGT GGCACAAAAA CTACAACAAA AGTAGAAGTA
CCGCAATCAT CTACCGCTGT TAACAATATT CCAATTGGCA CGAATGCGGC GGGTAATCCT
GTTATACAAC TTGATATTCC TGCTAATGTA GATGTTATTG CAAAGGAAGT TACAGACACT
AATGCTACCA CGTTAACGGA TAAGCTTAAT GATTCGCTTG ACGCATTAAC GACAGCATCT
ACAGGACAAA TTGATTCCAT AGCGGTGCAA ACTGGGATTG ATAACTACGT TGCAACACTA
TCAACGCCAG ACCAAGCCAA TGTTGTGGTG CGTACATTGG AGTTAAAATC TGCAAATGCA
ACAACGGGTG CAGAACTTGT AGTTACTGGT AATAGCGCAA TCGGTAGTAA TGAAGCGCTT
GTTATTGATA CTCGTGGTCT TCAACCAGGC TCAGTCCTTA ACCTTGAAAA TGTTGAGTTT
GCCATTATTA TCGGTGATAA CGTTACCATT CGTGGCGGTG ATGGTGCGAA TATTGTGTAT
GCTGGAGCTG GTCGCCAAGA TATTAAACTT GGAGATGAAT CGGATACCTT ACATGGTGGT
ACAGGCGACG ATATTGTAGC ATCTGAGGGT GGTGACGACT GGCTTTATGG CGACGATGGA
AACGATACTG TAAGCGGTGG TGCCGATAAC GACCATCTTT TTGGCGGTAC AGGTGACGAT
TCGCTTGATG GTGGCACGGG TAACGACACT CTTGATGGTG GTGACGGTAA TGATATGCTC
AATGGTGGTA CGGGTAACGA TGTGTTTACT GGTGGGGTAG GCACCGATAC CATCCAATTT
GCAGGATTAT TTAGCAACTA CACGATTACC TATAATCCTG GTGCTCATCA GTACGTGTTA
ACTGATACAA CAGGTGCGAC TAAAACGGTG TCGAGTACCG ATTTTGAACT CTTTAGCTTC
ACAGATGGTG TAAAGAGTGA TGATGATGTG TATGCGGTTG CTGCAAATCC TTATGGTCAA
CCGGAACACA TTATCGCCAA CGATCCTGCA TTTGTAGGCG TTGCAGGTCT TGGCTTAATT
GCAGCCCTGC TCTTCTTGTA A
|
|---|
| Protein sequence | MADFITLSNP SYSYNASKGK TTVQFDICFA SNEMAGSKIT GAKIDLQYNT SLVTAYQITN
PTFSFEGDFG TETASVWVAA FDQTANLTGS GATGQIAMLA TSNDANPIIV NGKVLTVTLS
VTGEVNADTF AITLQKTADG GNNSISNATT EYFLDGGTYV APPTSLADVT VDLHVNSDTG
TSNTDNLTND DTPTVTVNLT GKSLSEGQTL QIIDTSNSNA VVGTYTITST DATNGITTKD
VTLSTLTSGA HALKAQLNAG STAGTPSATA TTVTIDTTAP TSLADVPVDL KSSSDSGLST
DNITNATTPV ITVNLTGKTL VAGDIVQVID TSNGNAVVGS YTVTTGGTGS SLDITLTTPL
SLGAHALKAQ LVDVAGNVGT ASTNALTVTV DTTAPTAPTL ALATDSGSSN SDGITNVGTV
NVTGIETNAT WQYSTNGGTN WSNGTGTSFT LAAATYAVDA IRVRQTDVAG NVSGEGKIAT
AVTIDSSAPV APTLAFTDAG TSTTDGHTSN NTITVTGIES NATWQYSTNG GTNWSNGTGT
SFTIVDGTYN ANTIKVKQTD VAGNVSGEGS LAPAITVDTV RPTVTVTPVT TALSAQGTTT
ITMTMSEAVT GFAADDIKTS SKYSISNFSA TSSTVYTATY TANEATTDVA KELKFETNWT
DAAGNQPKFG PTVDITLNDA ALKIGETATV TFTFSEVPTG FDSSDISVTN ANGQLSGLAV
KSGSNGLVYE ATFTPTANVT SATNKITVGK DWTNAEGVAP TNDTTDSPNY AVDTFRPTAT
IVVADIALKA GETSLVTITF SEAVSGFDNA DLTIQNGTLT NVASSDGGIT WSATLTPTAD
ISDTTNVITL ANTGVNDVAG NAGTGTTDSN NYAIDTARPT ATIVVADTAL KAGETSAVTI
TFSEAVTGFD NSDLTIANGT LTPVASSDGG ITWTATLTPT TNLEDATNVI TVNKAGVTDA
AGNAGVSTTD SNNYTIDTQA PAAPTLSITD NGQSTSDNLT NNGTVTVSGL ETGATWQYST
NGGTNWTTGS GTSFTLGAGT YAANNIQVKQ TDAAGNVGIV GQITSQVDVD KVAPTLKSVV
VNGTSVVITY NEALDATNKP ATTDFTVSNN TVNNVAVDST AKTVTLTLGT TVVSGADVTV
SYADPTTVDD SNAIQDVAGN DAAKFTTTIS GTKTTTKVEV PQSSTAVNNI PIGTNAAGNP
VIQLDIPANV DVIAKEVTDT NATTLTDKLN DSLDALTTAS TGQIDSIAVQ TGIDNYVATL
STPDQANVVV RTLELKSANA TTGAELVVTG NSAIGSNEAL VIDTRGLQPG SVLNLENVEF
AIIIGDNVTI RGGDGANIVY AGAGRQDIKL GDESDTLHGG TGDDIVASEG GDDWLYGDDG
NDTVSGGADN DHLFGGTGDD SLDGGTGNDT LDGGDGNDML NGGTGNDVFT GGVGTDTIQF
AGLFSNYTIT YNPGAHQYVL TDTTGATKTV SSTDFELFSF TDGVKSDDDV YAVAANPYGQ
PEHIIANDPA FVGVAGLGLI AALLFL
|
|---|
| |