Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1901 |
Symbol | |
ID | 3747646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2420036 |
End bp | 2421094 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637774438 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_380194 |
Protein GI | 78189856 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTATA AAATTGTCTC TATTCCGGGT GATGGTATAG GTACCGAAGT TGTTGCTGGC GCTGTTGCTG TATTACGTCA ACTTGAAAAA AAATATGGCT TTACCGTTGA GATTGAAGAG CATCTTTTTG GTGGCGCTTC TTACGATGTG CATGGTGAAA TGTTAACCGA TGCTACGCTT GAAGCCTGCA AAAATTGCGA TGCCGTGCTG CTTGGAGCTG TTGGTGGTCC AAAATGGGAA AACCTTCCCC ACGAGCACAA GCCTGAAGCT GCGTTGCTTA AAATCCGCAA AGAGCTTGGC TTGTTTGCCA ACCTTCGCCC AGCAAAAGTG TATGATGCCT TAGTTGATGC TTCATCACTA AAAGCGGATG TTGTGCGTGG CACCGATTTT GTGGTTTTTC GTGAGCTAAC GGGTGGTATT TACTTCGGTC AACCTCGTGG CTACGATGAG AACAAAGGCT GGAACACCAT GGTTTATGAA AAGTATGAGG TTGAGCGTAT TGCTCGCCTT GCTTTTGAAG CGGCTCGCCA ACGCCAAGGG CGCGTTATGT CTATTGATAA GGCAAACGTC CTTGAAGTAT CACAATTGTG GCGGAACGTT GTTCACGCTG TACACGCCGA TTACCAAGAT GTTGAATTGA GTGATATGTA TGTGGATAAT GCTGCAATGC AAATTGTACG TAATCCAAAA CAGTTTGACG TTATTGTTAC TGGCAACCTT TTTGGTGATA TTCTGAGCGA TATTTCAGGC ATGATTACTG GTAGCCTTGG CATGTTGCCT TCGGCAAGCA TTGGTTCTAA GCACGCACTA TATGAGCCAA TTCACGGCAG TGCCCCCGAT ATTGCAGGAC AAAACAAAGC AAACCCCATT GCAACCATTG CTTCGGTAGC AATGATGTTT GAACACAGCT TTAAGCGTAC CGATATTGCT CGTGATATTG AACAAGCCAT TGAAGCTGCC CTTGCTACCG GTGTAAGAAC GGCAGACATT GCAGCAGCCG GCGATACAGC AGTTTCAACC ACAGCAATGA CTGAAGCCAT TATCAGCCAA CTGAAGTAA
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Protein sequence | MNYKIVSIPG DGIGTEVVAG AVAVLRQLEK KYGFTVEIEE HLFGGASYDV HGEMLTDATL EACKNCDAVL LGAVGGPKWE NLPHEHKPEA ALLKIRKELG LFANLRPAKV YDALVDASSL KADVVRGTDF VVFRELTGGI YFGQPRGYDE NKGWNTMVYE KYEVERIARL AFEAARQRQG RVMSIDKANV LEVSQLWRNV VHAVHADYQD VELSDMYVDN AAMQIVRNPK QFDVIVTGNL FGDILSDISG MITGSLGMLP SASIGSKHAL YEPIHGSAPD IAGQNKANPI ATIASVAMMF EHSFKRTDIA RDIEQAIEAA LATGVRTADI AAAGDTAVST TAMTEAIISQ LK
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