Gene Cag_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1873 
SymbolgatB 
ID3747025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp2380313 
End bp2381740 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content46% 
IMG OID637774410 
Productaspartyl/glutamyl-tRNA amidotransferase subunit B 
Protein accessionYP_380166 
Protein GI78189828 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 
TIGRFAM ID[TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATG AATTAGTTGT GGGCCTCGAG GTTCACTGCC AGCTTAATAC GGTTACCAAA 
GCTTTTTGTG GCTGCTCTGC CCAATTTGGT AAAGCGGCAA ATACCAACGT TTGCCCTGTC
TGCCTTGCTT TGCCGGGCGC TTTGCCTGTG CTGAATCGCC AAGTGGTAGA AGATGCTGTA
AAAATTGGCT TAGCGCTTGA CTGCCGCATT GCTCCCCATT CAGTGCTTGC CCGTAAAAAT
TATTTTTACC CCGATCTTCC TAAGGGTTAT CAAATTTCTC AGTTTGAAGA ACCAATTTGC
AGTGATGGCT CTATTGATGT TGAGCTTGAT GGTGTAAATC GCACCATTCA CTTAATTCGT
ATTCATATTG AGGAAGATGC AGGTAAGTCC ATTCACGATA TTGGCGACGA TACCTTTATT
GATTTAAATC GTAGTGGTGT GCCGCTGCTT GAAATTGTTA GCTATCCCGA TATTCGCTCG
GCAAAAGAAG CCTCAGCCTA CCTACAAAAG CTTCGCCAAA TTGTAAAATA TCTTGGCATT
TCCGATGGCA ACATGGAGGA GGGAAGCCTT CGCTGTGATG CAAACGTGTC GCTCCGCCCA
GTGGGCGCAA CTGAGTATGG GACGCGTACC GAAATTAAGA ATATGAACTC CTTTAAAAAC
GTTGAAAAAG CCATTGAATA TGAGGCTTTG CGTCATCGGG AGATTCTTGA AAATGGTGGC
GTTATTATCC AAGAAACCCG TTTGTGGGAT GCCGATAAAG GTGAAACGCG CTCCATGCGC
GGCAAAGAAT TTGCGCACGA TTATCGCTAC TTCCCTGATC CCGATTTAGT GCCCGTCTTA
GTGGATGAGG CAATGATTGA GCGCTTAAAG CTTGAGTTGC CCGAATTCCC CGAAATGCGT
GCTCGCCGTT TTGCCGCAGA CTATGGAATT CCCACTTATG ATGCAGGCGT GCTTACCGTA
GAGCGTGAAC TTGCTGATTA TTTTGAAGAA ACGGTAAAGC TATCGGGCGA TGCTAAAACA
TCCTCCAATT GGGTGATGGG CGAAGTAATG CGCACGTTAA AAGAGAAGTA TCTTGATATT
GCGGAATTCT CAATTCGTCC CGCACGTTTG GCGGGTTTAA TTCAGCTTAT CCATAACAAA
GTTATTAGCA ACACCATTGC AAAGCAGGTG TTTGAAGTTA TGCTGAACGA TGAGGCAGAG
CCAGCCGCAA TTGTGGAGCG TGATGGCTTA GCGCAGGTGT CGGATAGCGG AGCGCTTGAA
GCAGTTGCGC AAGAGGTGAT TGATGCCAAC CCCAAGCAAT TAGCCGAATA TCGTGAAGGC
AAAACCAAAC TGATGGGCTT TTTTGTAGGG CAGTGCATGA GCCGTATGAA AGGCAAAGCC
AATCCTCAGC TTGTGAACGA TATTTTATTG AAAAAGTTAG AAGGGTAA
 
Protein sequence
MDYELVVGLE VHCQLNTVTK AFCGCSAQFG KAANTNVCPV CLALPGALPV LNRQVVEDAV 
KIGLALDCRI APHSVLARKN YFYPDLPKGY QISQFEEPIC SDGSIDVELD GVNRTIHLIR
IHIEEDAGKS IHDIGDDTFI DLNRSGVPLL EIVSYPDIRS AKEASAYLQK LRQIVKYLGI
SDGNMEEGSL RCDANVSLRP VGATEYGTRT EIKNMNSFKN VEKAIEYEAL RHREILENGG
VIIQETRLWD ADKGETRSMR GKEFAHDYRY FPDPDLVPVL VDEAMIERLK LELPEFPEMR
ARRFAADYGI PTYDAGVLTV ERELADYFEE TVKLSGDAKT SSNWVMGEVM RTLKEKYLDI
AEFSIRPARL AGLIQLIHNK VISNTIAKQV FEVMLNDEAE PAAIVERDGL AQVSDSGALE
AVAQEVIDAN PKQLAEYREG KTKLMGFFVG QCMSRMKGKA NPQLVNDILL KKLEG