Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1873 |
Symbol | gatB |
ID | 3747025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2380313 |
End bp | 2381740 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637774410 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_380166 |
Protein GI | 78189828 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTATG AATTAGTTGT GGGCCTCGAG GTTCACTGCC AGCTTAATAC GGTTACCAAA GCTTTTTGTG GCTGCTCTGC CCAATTTGGT AAAGCGGCAA ATACCAACGT TTGCCCTGTC TGCCTTGCTT TGCCGGGCGC TTTGCCTGTG CTGAATCGCC AAGTGGTAGA AGATGCTGTA AAAATTGGCT TAGCGCTTGA CTGCCGCATT GCTCCCCATT CAGTGCTTGC CCGTAAAAAT TATTTTTACC CCGATCTTCC TAAGGGTTAT CAAATTTCTC AGTTTGAAGA ACCAATTTGC AGTGATGGCT CTATTGATGT TGAGCTTGAT GGTGTAAATC GCACCATTCA CTTAATTCGT ATTCATATTG AGGAAGATGC AGGTAAGTCC ATTCACGATA TTGGCGACGA TACCTTTATT GATTTAAATC GTAGTGGTGT GCCGCTGCTT GAAATTGTTA GCTATCCCGA TATTCGCTCG GCAAAAGAAG CCTCAGCCTA CCTACAAAAG CTTCGCCAAA TTGTAAAATA TCTTGGCATT TCCGATGGCA ACATGGAGGA GGGAAGCCTT CGCTGTGATG CAAACGTGTC GCTCCGCCCA GTGGGCGCAA CTGAGTATGG GACGCGTACC GAAATTAAGA ATATGAACTC CTTTAAAAAC GTTGAAAAAG CCATTGAATA TGAGGCTTTG CGTCATCGGG AGATTCTTGA AAATGGTGGC GTTATTATCC AAGAAACCCG TTTGTGGGAT GCCGATAAAG GTGAAACGCG CTCCATGCGC GGCAAAGAAT TTGCGCACGA TTATCGCTAC TTCCCTGATC CCGATTTAGT GCCCGTCTTA GTGGATGAGG CAATGATTGA GCGCTTAAAG CTTGAGTTGC CCGAATTCCC CGAAATGCGT GCTCGCCGTT TTGCCGCAGA CTATGGAATT CCCACTTATG ATGCAGGCGT GCTTACCGTA GAGCGTGAAC TTGCTGATTA TTTTGAAGAA ACGGTAAAGC TATCGGGCGA TGCTAAAACA TCCTCCAATT GGGTGATGGG CGAAGTAATG CGCACGTTAA AAGAGAAGTA TCTTGATATT GCGGAATTCT CAATTCGTCC CGCACGTTTG GCGGGTTTAA TTCAGCTTAT CCATAACAAA GTTATTAGCA ACACCATTGC AAAGCAGGTG TTTGAAGTTA TGCTGAACGA TGAGGCAGAG CCAGCCGCAA TTGTGGAGCG TGATGGCTTA GCGCAGGTGT CGGATAGCGG AGCGCTTGAA GCAGTTGCGC AAGAGGTGAT TGATGCCAAC CCCAAGCAAT TAGCCGAATA TCGTGAAGGC AAAACCAAAC TGATGGGCTT TTTTGTAGGG CAGTGCATGA GCCGTATGAA AGGCAAAGCC AATCCTCAGC TTGTGAACGA TATTTTATTG AAAAAGTTAG AAGGGTAA
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Protein sequence | MDYELVVGLE VHCQLNTVTK AFCGCSAQFG KAANTNVCPV CLALPGALPV LNRQVVEDAV KIGLALDCRI APHSVLARKN YFYPDLPKGY QISQFEEPIC SDGSIDVELD GVNRTIHLIR IHIEEDAGKS IHDIGDDTFI DLNRSGVPLL EIVSYPDIRS AKEASAYLQK LRQIVKYLGI SDGNMEEGSL RCDANVSLRP VGATEYGTRT EIKNMNSFKN VEKAIEYEAL RHREILENGG VIIQETRLWD ADKGETRSMR GKEFAHDYRY FPDPDLVPVL VDEAMIERLK LELPEFPEMR ARRFAADYGI PTYDAGVLTV ERELADYFEE TVKLSGDAKT SSNWVMGEVM RTLKEKYLDI AEFSIRPARL AGLIQLIHNK VISNTIAKQV FEVMLNDEAE PAAIVERDGL AQVSDSGALE AVAQEVIDAN PKQLAEYREG KTKLMGFFVG QCMSRMKGKA NPQLVNDILL KKLEG
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