Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1848 |
Symbol | rplB |
ID | 3747229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2357643 |
End bp | 2358482 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637774386 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_380142 |
Protein GI | 78189804 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.492965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATAA GGAAGTTAGC GCCGGTTACA CCTGGGTCGC GATTTATGTC GTACCCCGTG TTTGATGAAA TCACTAAGAG CAAACCTGAA AAAAGCTTGC TTGAACCTCT GACAAAATCA GGTGGTAGAA ACAGTGCTGG AAGAAAAACC TCTCGTCACA GAGGTGGTGG ACACAAGCGT CACTACCGTA TTATTGACTT TAAGCGCAAT AAAGACGGTA TTGTGGCGAC GGTTGCTGCT ATTGAATATG ACCCAAATCG TTCTGCAAGA ATTGCATTAT TGCATTACAT TGATGGAGAA AAACGTTATA TTCTCGCCCC CAAAGGCTTA AAGGTTGGTG ATAAGGTTGA AAGTGGTGAA AAAGTCGAGA TTAAGACTGG CAACACCATG CCTATGAAGA ATATTCCTCT GGGTACCGAT ATTCACAATA TTGAAATGAA AGCTGGTAAA GGTGGTCAGA TTGTTCGCTC GGCTGGTGCC TTTGCAGTGC TTGCAGCTCG TGAAGGTGAT TATGTTACTT TGAAATTGCC TTCAGGAGAA ATTCGTAAGG TTCGTGTAGA GTGCCGTGCA ACAATTGGAG TTATCGGTAA CGCTGATCAC GAAAATATTG ATCTTGGAAA AGCTGGAAGA AGTCGTTGGC TTGGTATTCG TCCTCAAACT CGAGGCATGG CAATGAATCC AGTTGACCAT CCAATGGGTG GTGGTGAAGG TAAATCAAAA TCAGGTGGTG GACGTAAGCA TCCAAAATCA CCTTGGGGTC AGCTTGCAAA AGGTTTAAAA ACCCGTAATC GCAAAAAGGC TTCACAAAAG CTTATTGTTC GTGGCAGAAA CGCCAAATAA
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Protein sequence | MAIRKLAPVT PGSRFMSYPV FDEITKSKPE KSLLEPLTKS GGRNSAGRKT SRHRGGGHKR HYRIIDFKRN KDGIVATVAA IEYDPNRSAR IALLHYIDGE KRYILAPKGL KVGDKVESGE KVEIKTGNTM PMKNIPLGTD IHNIEMKAGK GGQIVRSAGA FAVLAAREGD YVTLKLPSGE IRKVRVECRA TIGVIGNADH ENIDLGKAGR SRWLGIRPQT RGMAMNPVDH PMGGGEGKSK SGGGRKHPKS PWGQLAKGLK TRNRKKASQK LIVRGRNAK
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