| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1704 |
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| Symbol | |
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| ID | 3746970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2214894 |
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| End bp | 2216699 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637774241 |
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| Product | peptidase S49, protease IV |
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| Protein accession | YP_379998 |
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| Protein GI | 78189660 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.100824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA GTTCCATTCC ACAAAAGCGT CGCGGCTGTT TTCGCCCGGG CTGCTTATGG
TTTTTAGTTG TGCCGCTCTT TATTGTGGTT GCACTTTTTT GGGCGTTTCG CTCTTCGCAC
GATATGCCCG ATCGTTTTGT GTTGGTTGTT CCTCTTAGTG GCAAATTAGC CGAAGTCAAT
AACGAGCGCT CCTCACTGCC CTTTATGCCA TCACAAGGCG ATTTATCGCT GCAAGAGGTG
CTCTTTGTGC TGCACGAAGC TGCCAAGGAT GAGCAAGTAA GTGAAGTGCT GCTGCAGCTT
GATGGCGTTG AAGCTGCACC CGCTAAAATT GCCGAAGTAC GCGCGGCTGT TGCTGACGTG
CGCCGCAAAG GCAAAAAGGT GAGCGCATTT TTATACCGTG CAGAGGATAG CGATTACTTG
CTTGCTACTG CGGCTGATAC CATTATTATG CAACGCGGTG CTTCGCTTTT GCTGGATGGC
TTAAAAGCGG AGTCGCTTTT TTATACGGGA ACATTAAACA AGCTCGGCAT TACCGTACAA
GCCGCTCAAT GGAAAGAGTA CAAAAGCGGC ATTGAGCCTT TTACCCGCAC AAGTGCCAGC
AAAGAATACC GTGAGCAAAT CAACATGCTG CTTGATGATG TTTACAACAA CTACCTTTCA
GCCGTAAGCG AACGGCGTAA AATAAGCCGA TCGGCATTTG AGGCTATTAT TAATAACGAG
GCGTTGCTTT CGGCAGAACG TGCTAAAGCG CTTGGTCTTG TTGACCGCAT TGCAACTTTT
TGGGATGTAG AGCGCTCTAT GACCAAACAG CTTACGGGCG AAGAGCTAAG TAGCGAGAAT
AATGCGCTGG TTCATGCTGC CGATTACCGC AATGCAATGG ATTACCCGCA ACACTCCAGC
ACAAGCGATG CCATTGCCGT TATTACCATG TCGGGTCCCA TTATGCGCTC GGTAGATAAC
CTTGATGACG GCATTGATGT CGCCACTATG CAACATTCGC TTGAAGCTGC CCTTGAAAAC
AAGAGCGTCA AAGCCATTGT GCTCCGCATT GATAGCCCGG GTGGCGAAGC TATTGCCTCA
GCCGATATTT TGCAAATGAT TAACGCTGCT GCTACCAAAA AAACGCTTGT CGTCTCAATG
TCGGGCGTTG CTGCATCAGG CGGTTACATG GTAGCGCTTG GCGGCAAAAC CATTGTAGCA
CATCCGCTCA CTATTACGGG TTCCATTGGC GTTTATGCGC TCAAACCAAC CATTCAAGGA
TTGGCTGAAA AGGTTGGCTT GCAACGCGAA GTTATTACAA GAGGACGTTT TGCTGATGCC
ACTTCACCCT TTACTCCGCT TGAAGGAGAA GCCTACAACA AATTTGTAGC CTCAGCAGGC
GACGTCTATA ACGACTTTAT CAGCAAAGTT GCAACATCAC GCCGCATGAA GGTAACAGCC
GTTGACTCTG TTGCAGGCGG ACGGGTATGG ACGGGCAGCC GTGCCAAGCA AGTTGGTTTG
GTTGACCGCA TGGGTGGGCT TTTTGATGCC CTTGCTTTAG CCAAAGAGCG TGCAGGCATT
AGCAAAGATA AAGAGCCAAC CATTCTCCTC TATCCCCTTC AGCAAGGATG GCTACAATCG
CTGCTGGGTG GCGCTACCCT CAATTCAGTA ACCAAAGCAA TTGCAACCGC GCTTCTCGGT
AACGTTTTAC CAATAAACGT GGAGCAACAG CCACTTTCCG CCATGCAACC ATTTTACGAT
ATGCTGATTC GTTCAGGCAA ACCGCACATG GTAGCACTTA TGCCCGCTGA AGTGGTGGTG
AAGTAA
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| Protein sequence | MNNSSIPQKR RGCFRPGCLW FLVVPLFIVV ALFWAFRSSH DMPDRFVLVV PLSGKLAEVN
NERSSLPFMP SQGDLSLQEV LFVLHEAAKD EQVSEVLLQL DGVEAAPAKI AEVRAAVADV
RRKGKKVSAF LYRAEDSDYL LATAADTIIM QRGASLLLDG LKAESLFYTG TLNKLGITVQ
AAQWKEYKSG IEPFTRTSAS KEYREQINML LDDVYNNYLS AVSERRKISR SAFEAIINNE
ALLSAERAKA LGLVDRIATF WDVERSMTKQ LTGEELSSEN NALVHAADYR NAMDYPQHSS
TSDAIAVITM SGPIMRSVDN LDDGIDVATM QHSLEAALEN KSVKAIVLRI DSPGGEAIAS
ADILQMINAA ATKKTLVVSM SGVAASGGYM VALGGKTIVA HPLTITGSIG VYALKPTIQG
LAEKVGLQRE VITRGRFADA TSPFTPLEGE AYNKFVASAG DVYNDFISKV ATSRRMKVTA
VDSVAGGRVW TGSRAKQVGL VDRMGGLFDA LALAKERAGI SKDKEPTILL YPLQQGWLQS
LLGGATLNSV TKAIATALLG NVLPINVEQQ PLSAMQPFYD MLIRSGKPHM VALMPAEVVV
K
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