| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1642 |
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| Symbol | |
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| ID | 3747949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2140412 |
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| End bp | 2142529 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637774180 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_379937 |
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| Protein GI | 78189599 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAACC TTTGGAACGA TGCAGAATTA CAGGGCTTTG TGAGCAATGT GTGCCACGAG
CCTGATGACC ATCCTGAGCT TGCAGCATTG GTGTATGCTT CGCGGTTGCT TGGGCGTGAA
CGTTCATTAG TAATGCACGG TGGTGGCAAT ACCTCCGTTA AGTGTGGGCT TACCGATATG
GTTGGCAACC ATGCGGAAGT GTTGCTTATT AAAGCAAGTG GTATTGATTT AAGCAATGTT
ACCTGTCGCG ATTATACCCC GCTCCGCTTA GGTCCACTGA GTAAACTTGT GGAGCTGTGC
AGCAGTAACG ATCCTATTCA TGCTGAGCGT GTTGAACGTT TTTCAACGAA AGAGTTTAAG
CATCTTTTAA TGCTGAATAT GTTCAGCCTT ACTGACCATA TGGCTGAAAA ACGTTTAACT
CCATCTATTG AAACGCTGCT CCATGCCTTT CTGCCTCATC GCTACATTTT ACATACCCAC
TCATTTGCCT TGCTTACCAT GAGCAATCAG CCAAACGGTG AAGCGCTCTG CCGCGAAACC
TTAGGCGAGG CATTTGGCTC GGTGCCTTAC ATTAAACCCG GTCTTGGTTT GGCGCGTGCC
GCCGCTGGTG TGTATGAAGC ACATCCCGCA ATTGAGGGGC TTGTGTTGCA AAAGCATGGC
TTAGTAACTT TTGGTGAAAC GGCTCAAGAG GCGTACAACC GCATGATTGA CGCTGTTACA
AAACTTGAAG AGCGCATTGC TTTGGCTGGT CGTAAACCAT TTACAACGGT TCCTTTGCCC
GAAGAAATTG CAAAAGTGGA AGATGTTGCT CCCATTATTC GTGGAGCTTG TGCTGAGGAA
AAAGAGGTTG GTCGTCGCGA TTATCAACAT TTGATTCTTG ATTTTCGTAC CTCCGATGAA
ATTCTCACTT ACGTCAATAG TGCCGATGTT GTGCGCATGA GTCAAAAAGG CTCCATGACG
CCCGATTTTA TTATTCGTAC AAAAAATAAG CCACTTGTGG TGCCTGCACC TGACGCAGCG
GATCTTAACG GATTTAAAGC TGCTGTTGAT GAAGCGGTGC AGCGCTATCG TGATGCCTAT
ATTGCCTACT TTAATGCGCA ACAGCAAGCT TCAGGTATGG AGGTTACCAT GCTTGATCCT
ATGCCGCGTG TGGTGTTGGT GCCAGGGCTT GGGCTTTTTG GTTTAGGAAA AAGTGCCGCG
GCAGCCGCAG TGAATGCTGA TATTGCTACC TGTACTGCCA CTGCTATTCT TGATGCTGAA
TCGGTGGGTT CTTTTGAATC CATTAGCGAG CGTGAAGCTT TTGATATTGA GTATTGGGAT
ATGGAGCAGG CAAAAATCAA TAAGGTGTAT CACGGGACGT TTGCGGGTAA AGTGGTGATG
GTAACGGGAG GAGCAAGTGG CATTGGGCTT GCTACAGCCA AAGCATTTCG TCAGCGTGGT
GCTGAGTTAG TGGTGTTAGA TCTTTCTCAA GAAGCGCTTG ATAAAGCGGC TGAAGAGATT
GGCGGTAATC CCTTAACGCT TACCTGCAAT GTTACCTCAC GTGCTGATAT TCGTGCGGCG
TATGATGCGG TTTGCAAGCG TTATGGCGGT GTTGATGTAA TTGTCTCCAA CGTTGGTGCG
GCTATTCAAG GGCGCATTGG CGATGTGTCG GATGAGTTGT TGCGCAAGAG TTTTGAAATT
AACTTTTTCT CCCACCACTA CATTGCTCAA GAAGCGGTAC GTGTGATGCG TTTGCAAGGC
ACGGGCGGTG TGTTGCTTTT TAATGTTTCA AAGCAAGCGG TTAATCCAGG TCCCGATTTT
GGACCTTACG GTTTACCAAA AGCTGCCACC ATGTTTCTTG TGCGCCAATA TGCACTTGAC
CACGGTCGTG ATGGCATTCG TGCAAACGGC ATTAATGCCG ACCGCATTCG CACCGGACTT
TTGACTGAAG AGATGATTAA ATCGCGCTCG GCGGCGCGTG GTTTAAGCGA GCACGAATAT
ATGGCTGGTA ATTTGTTGCA ACTTGAGGTA TATGCTGAAG ATGTGGCTGA AGCCTTTGTG
CATTTAGCCC AAGAAATTCG CACCAACGCC GCAATCATTA CCGTTGATGG TGGCAACATT
GCTGCTACGT TGCGGTAG
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| Protein sequence | MQNLWNDAEL QGFVSNVCHE PDDHPELAAL VYASRLLGRE RSLVMHGGGN TSVKCGLTDM
VGNHAEVLLI KASGIDLSNV TCRDYTPLRL GPLSKLVELC SSNDPIHAER VERFSTKEFK
HLLMLNMFSL TDHMAEKRLT PSIETLLHAF LPHRYILHTH SFALLTMSNQ PNGEALCRET
LGEAFGSVPY IKPGLGLARA AAGVYEAHPA IEGLVLQKHG LVTFGETAQE AYNRMIDAVT
KLEERIALAG RKPFTTVPLP EEIAKVEDVA PIIRGACAEE KEVGRRDYQH LILDFRTSDE
ILTYVNSADV VRMSQKGSMT PDFIIRTKNK PLVVPAPDAA DLNGFKAAVD EAVQRYRDAY
IAYFNAQQQA SGMEVTMLDP MPRVVLVPGL GLFGLGKSAA AAAVNADIAT CTATAILDAE
SVGSFESISE REAFDIEYWD MEQAKINKVY HGTFAGKVVM VTGGASGIGL ATAKAFRQRG
AELVVLDLSQ EALDKAAEEI GGNPLTLTCN VTSRADIRAA YDAVCKRYGG VDVIVSNVGA
AIQGRIGDVS DELLRKSFEI NFFSHHYIAQ EAVRVMRLQG TGGVLLFNVS KQAVNPGPDF
GPYGLPKAAT MFLVRQYALD HGRDGIRANG INADRIRTGL LTEEMIKSRS AARGLSEHEY
MAGNLLQLEV YAEDVAEAFV HLAQEIRTNA AIITVDGGNI AATLR
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