| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1539 |
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| Symbol | |
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| ID | 3746598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 2015173 |
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| End bp | 2018994 |
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| Gene Length | 3822 bp |
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| Protein Length | 1273 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637774079 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_379837 |
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| Protein GI | 78189499 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTA TAATTCCTGA TTTTCAACAA CCTGATGCTG TAGTAATTGC ATTACTTGAT
TCATTTTCTG ACGCCTTGTT TATTATGGAT GCTGATAGCA TTATTCTTCA TGCTAATGAG
GCTTTTGCAA CACAGTGTGG TAAAAAACCA GAAGAGTGTA TTGGTTTTAA TGCGTGCAGC
CTTATAGAGT CGGTGTTTGT AATGCCTCAT TTTGCTTATG AGTGTAGTGC AACAACCAAT
GAGGTACTCG ATAGTGCAAA GCAACAATCA TTTGAGACTA CTTATTTACA TCAAAGCTGG
AAAACCACCA TAACCCCATT GCATCTAAAA GAATACGATC AAGGTGCCAC ACAACTCCTT
GTTCGCATTG AAGATATTTC AGAAAAAAAG AATCTTGAAC AGCAATCACA AGTAACAGAT
ACACTGCACA AAACACTGCT TGAAACTATT CCGGGTTTTG CCATTATTCT TGATGCTTCT
GGTCATCTGA TGGCATGGAA TAATTACACT CGTACTATTA TTTTCGGTAA AACCGATAAT
GAAATGTACG ATGTTGATCC ATTTGGTTTT ATATGTCCTA CCGAAAGAAC TTCTATTAGA
AAAAAATTCT TTAAAACGCT TCGCGCTGGA TGTGAAAAAA GCGCTGAAAT AAAAATTTTT
CCACAAAAAG AAAAACATGC TATTTGGCTA CTCATTCATG CAAAACCTGT ATTTATTGAT
AATCAAATGT GTGTTGTTGC TGTTGGAATT AACATTACCG AACGCAAGCG TGTTGAAGCT
GAACTGCTTG AAAATAAGCT ACGCTACAAC CATGCGATGG AAGCTGCTCG TGCTGGAATA
TGGGAGTGGA ATGTTAAAAC CGATAAACTC ACTTGGTCAG AACAATTATG GGGATTGTAT
GGGCTACAAG TCAATAGTGA ACCTCTAACT CATCAGCTTT GTGTTACAAC GGTTCATCCC
GATGATCGAG AAATGGCATC GCAGATGATT AAATCAGCCG TGCAACAACA AATTCCTGCC
TCTATTGAAT ATCGAGTTCT TCATCCTGAT GGCTCAGTCC ATTGGCTCAA TTCCCGTGGC
ATTCCCCTGC ATGACGATGA TGGAACACTG CATCATTACA TTGGCACTAT TATTGATATT
ACTGAACGCA AGGAAACAGA AATTGTGCTG CTTGAAAACA AAATACGACT GAAACAAGCG
TTGAAAGCTA CCCGTGCAGG GGTTTGGGAA TGGGAGCTTG CAACTAATGA AAATAGTTGG
TCAGACGAAA TATGGGCACT CTATGGAATT GAACAAGATC ATCAACAACC ATCGTTTGAC
TTATGGGTAA ATACCGTTCA TCCAGATGAT CGCTTACTCG CAATAAAGGC TGTTACAGAA
GCTACTCAAC AGGGCGCAGA AATTAACGTT GAGTATCGTG TTTGCCATCA TGACGGTTCT
GAGCATTGGC TTATGTCGCG TGGTAAACCA ATATTAGACC CGCAAGGCAA TACCATCCGT
TATATTGGAA CTGCCCTTGA CATTACAGAG CGCAAAAAAA TGGAAATTGC GCTTGGGGAA
AGCCAACGGC GCTTTACCTT TGCGCTTGAA GCTACCAATG CCGGTGTTTG GGAGTGGGAT
ATTAAAACCG ACGTCATTAC GTGGACTGAG CGAGTATGGA CACTCTATGG TTTAGAGCCT
TTTAGTGCAA CGCCCTCGCA TCAGTTATGT GCAACACACG TTCATCATGA TGATTACGAA
AAAATCTTTC AAAACATCAT GGTAGCCGTT CAACGCGAAA GCAATATCAA CGTTGAATAT
CGTGTATGCC ATCCTGATGG TACAACTCAT TGGCTCATGT GTCGGGGAAT GCCTTTGCGC
AACGCAAACG GCACCGTTTC ATGCTATATG GGCACGGTAA TGGATATTAC AAAACGGCGA
GAGTTATTAG AAAAACTACG GAGAAGTGAA CAGCGTTATC GCCTGCTTTT CGATAATATG
ATGAATGGTT TTGCCTATTG CAATATGATA TATGATGGCA AAAAACCAAT AGATTTTGTT
TTTCTTAATG TAAACCAAAC ATTTAAAAAA TTCTGTAAAA CAAAAGATGT TGTAGGTAAA
AAAGCAAGCG AAGTCATACC TAATTTTATG ACGTTAGCTA ATGAATTATT TGTGGTATGT
GCTCGCGTAG CTCATAGTTG CCAATCGGAA CAATTTGAAT ATTTCTTTAA GCCATTTAAT
GAATGGCTTT TTATCTCGAT TTCAAGCCCA CAGAAAGGCT ATTTTATGGT GATATTCGAT
ATCATCTCTG AACGCAAACG GGCAGAGCAA CTTATTTTGG ATAGCAAGCT AAAACTCGAA
GCCGCACTTG AAAGCATGAG TGATGCTATT TTTATTTCTG ACACTGCGGG ACGTTTTATT
GAATTCAACA ACGCATTTGC CGCTTTCCAT AAGTTTGAAA GAAAAGAAAA ATGCTTTATG
ACGCTTACCG AATATCCAGC CATTCTCGAC CTTTTTACCG ATAATAACCA ACTAACCGAT
CTTGCAGAAT GGCCAGTATC AAGAGCATTA CAGGGTGAAA CCATGACCAA TGCGGAATAC
ACCTTACATC GTAAAGACAC AAACCATACA TGGATAGGAA GCTATAATTA TGCACCTATT
CGCAATAACG AAGGGGAAAT TACCGGTTCT GTTGTTACTG CTCGCGACAT TACCGAACAA
AAGCTCATTG AAAAAACACT TAAAGAAAGC GAACTTAAGT TTAGAAGTAT TTTTGACTAT
TCACCCGTTG CTATTGGTAT TGGCAATGCT ACAAACGGTA TGCTCATAGA TGTTAACACC
TTTTGGTTAG AACTTTTTGG CTACACCAAA GAAGAAGTCG TTAATCAAAC CGTAACCGAT
ATTGGTATTT ACGTTAAACC ACAAGAACGA AACGAGATTC TTGACATTCT TGCAGCACAT
GGTAGAGTAA CTAACAAACC TGTTCGATTA CGCAAAAAAA GTGGTGAATA TATAACGATT
CTCTACTCAT CGGTATTTAT GAAGCTTGAC CATAAAACCA TTTTACTCGT AATTATTACC
GATGTTACGT TGCAAGAAAT ACAACAACAA AACATTACGC TGCTTGAAAA AGCTGTAGCT
GAACGCACAC AACAATTACA AGACGAAGTG GAACAGCTTC AACGCTTTAT AAGTATGATA
TCTCACGAAT ACCGCACACC ACTTGCAATT ATTCGAGGCA ATCTTGATCT CATTGGTTTA
AAAAACAAAA CAAAGAAAAT TTCCAATGAA GCTGAAATCA ATAAAATAAA TCGAGCTATT
GATCGCTTGG TTGAAGTAAT GGAAGTCTCT ATGCAAGAAA GTCGAATGAT AGAATCTAAG
CAAGAAACCG TCATGACAAC GTTCCAGATT GCCGCAATAG TTACCTCACA GATAGAAACA
TTCCGTGCCA TGTGGACTGA ACGCTTAATT ATATATTCAG AAACGGTAGA AAATAGCTTA
GTGCTTGGTG AACCATCGCA ACTCAAATTA GCCATTTTTA ACCTTTTAGA TAATGCACGA
AAATACTCAC CCACTGATTC ACCTATCAAA GTTACATGCT CTCTTGATGC CGATACGGTT
ATGATTCGAA TACGTAACTA TGGTACAAGT ATTACCAAAG ATGAAGAAAA AACGTTATTT
GAAAAATTTC AGCGTGGCAG CAACTCTATG AATACAAGTG GAGCTGGTTT AGGGCTTTGG
CTTGTAAAAA GCATTATCAA TCGCCATAAT GGACAAGTAA GCTTAACCTG TATTGATTCA
GGTGTAGAAA CGTTAGTTCG GTTACCTTTG CACACAACGT AA
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| Protein sequence | MNTIIPDFQQ PDAVVIALLD SFSDALFIMD ADSIILHANE AFATQCGKKP EECIGFNACS
LIESVFVMPH FAYECSATTN EVLDSAKQQS FETTYLHQSW KTTITPLHLK EYDQGATQLL
VRIEDISEKK NLEQQSQVTD TLHKTLLETI PGFAIILDAS GHLMAWNNYT RTIIFGKTDN
EMYDVDPFGF ICPTERTSIR KKFFKTLRAG CEKSAEIKIF PQKEKHAIWL LIHAKPVFID
NQMCVVAVGI NITERKRVEA ELLENKLRYN HAMEAARAGI WEWNVKTDKL TWSEQLWGLY
GLQVNSEPLT HQLCVTTVHP DDREMASQMI KSAVQQQIPA SIEYRVLHPD GSVHWLNSRG
IPLHDDDGTL HHYIGTIIDI TERKETEIVL LENKIRLKQA LKATRAGVWE WELATNENSW
SDEIWALYGI EQDHQQPSFD LWVNTVHPDD RLLAIKAVTE ATQQGAEINV EYRVCHHDGS
EHWLMSRGKP ILDPQGNTIR YIGTALDITE RKKMEIALGE SQRRFTFALE ATNAGVWEWD
IKTDVITWTE RVWTLYGLEP FSATPSHQLC ATHVHHDDYE KIFQNIMVAV QRESNINVEY
RVCHPDGTTH WLMCRGMPLR NANGTVSCYM GTVMDITKRR ELLEKLRRSE QRYRLLFDNM
MNGFAYCNMI YDGKKPIDFV FLNVNQTFKK FCKTKDVVGK KASEVIPNFM TLANELFVVC
ARVAHSCQSE QFEYFFKPFN EWLFISISSP QKGYFMVIFD IISERKRAEQ LILDSKLKLE
AALESMSDAI FISDTAGRFI EFNNAFAAFH KFERKEKCFM TLTEYPAILD LFTDNNQLTD
LAEWPVSRAL QGETMTNAEY TLHRKDTNHT WIGSYNYAPI RNNEGEITGS VVTARDITEQ
KLIEKTLKES ELKFRSIFDY SPVAIGIGNA TNGMLIDVNT FWLELFGYTK EEVVNQTVTD
IGIYVKPQER NEILDILAAH GRVTNKPVRL RKKSGEYITI LYSSVFMKLD HKTILLVIIT
DVTLQEIQQQ NITLLEKAVA ERTQQLQDEV EQLQRFISMI SHEYRTPLAI IRGNLDLIGL
KNKTKKISNE AEINKINRAI DRLVEVMEVS MQESRMIESK QETVMTTFQI AAIVTSQIET
FRAMWTERLI IYSETVENSL VLGEPSQLKL AIFNLLDNAR KYSPTDSPIK VTCSLDADTV
MIRIRNYGTS ITKDEEKTLF EKFQRGSNSM NTSGAGLGLW LVKSIINRHN GQVSLTCIDS
GVETLVRLPL HTT
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