Gene Cag_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1478 
Symbol 
ID3747969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1944524 
End bp1945501 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content30% 
IMG OID637774013 
Productglycosyl transferase 
Protein accessionYP_379777 
Protein GI78189439 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00283905 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAGT ATTTAATATC AGTTATTATT GCAGTCTATA ACCCAAATGC TATTTTTCTT 
CAAAAAGCTA TTCAGTCAGT ATTAAATCAA AGTTTTCCTG TATTAGAATT AATATTGGTT
AATGATGGTG GAAATGAAGA ATTTCGTAAT TTATTGCCTA CAGATTCTCG AATTAAAGTA
TTTCGAAAAG TAAATGAAGG TGTTGCCCTT GCTCGTAATT ATGCTATTCA ACAATCTCAA
GGTGAATATA TAGCCTTTCT TGATCAAGAT GATTATTGGT TTCCACATAA ACTTGAGAAA
CAAATTTCAA TGATTCCATC TGATCAACCA CAATGTTTTG TGGTTTCTCC TATTCAAATT
ATTGATTCAG TTGGAAGTGT TGTTGATAAA AATAACTTAG CAGCAACAAG TCTGTATAAA
AATAACTTAT CTCTTGTAAA CCCTTTTTTA GGGTTATGTT ATGGTAATTA TATTTATTCA
TCCACGCCAT TAATTCATAA AAAAGTTTTC GAAATTGTTG GGTTATTTGA TGTTGCTGCA
CAGCCTCATG ATGATTGGGA TATGTATTTA AGAATACTGT ATGCAGGTGT TCCTTTTTTC
AGATATACGG ATTCTGCATT GTCAGTTTGG CGAATACATG ATTCTAATGA GTCGCATAAA
ATTAAGGCAA TGTTATTATC AAAATGTTAT GTTGAAAAGA AATTGTTAGA ATTGAATTTA
GTTGCTCCAG TTAGAGAGGT TGTTACGATT AATTTATTGT TTGATAATGT TGAATTAGCA
CATTTGTTTT ATAAAGAAAA TAATACTCCT GAATTTCGTT TTCTTATGAA AAGATATTTA
CCATCTCTTA TTCGTGTTTT TTTTGTTCGG TTCAATAAAA CATTTGAACT TGATAAAATT
TTGTTTCGTC GTATTCGTAA GATTATCCTT AAGTCATTTC GGCGTTACAT TGTTTCTTTT
TTGAGATGTA ATGGATAG
 
Protein sequence
MREYLISVII AVYNPNAIFL QKAIQSVLNQ SFPVLELILV NDGGNEEFRN LLPTDSRIKV 
FRKVNEGVAL ARNYAIQQSQ GEYIAFLDQD DYWFPHKLEK QISMIPSDQP QCFVVSPIQI
IDSVGSVVDK NNLAATSLYK NNLSLVNPFL GLCYGNYIYS STPLIHKKVF EIVGLFDVAA
QPHDDWDMYL RILYAGVPFF RYTDSALSVW RIHDSNESHK IKAMLLSKCY VEKKLLELNL
VAPVREVVTI NLLFDNVELA HLFYKENNTP EFRFLMKRYL PSLIRVFFVR FNKTFELDKI
LFRRIRKIIL KSFRRYIVSF LRCNG