| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1327 |
|---|
| Symbol | |
|---|
| ID | 3746608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1792836 |
|---|
| End bp | 1794650 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637773864 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_379630 |
|---|
| Protein GI | 78189292 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000155487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAGCG CTTTCGCTCA GGAACATTGC GCCATTAAAA TTCCTTCCAC ACTTTTCATG
AAACAGCTTC TTAGCCTAAA ACCTTACCTC TTAAAGTATA AAAAAAATCT TTGGTCGGGC
TTTTTCTTTA TTGTGTTGCA TAATCTTTTT GCGGTTGCAG CGCCAACCTT TATTGGTAAG
GCGGTTGATG GCATGAGTGG TGCCCTTAGC CTTTCAGCCA TTCTTACTGA TGTTGGTTTT
TATTTTCTCC TAACGTTGCT GGGTGGCTAC TTTCTTTATT TGGTGCGTCA GCGCATTATT
GTAACGTCGC GCCATATTGA GTTCGATCTT AAAAATAATT ACTACCAGCA TTTACAGCGC
CTTCCTCGTA GCTTTTATAA TGCCACAACT ACTGGCGAAC TTATTTCGCG CGGCACTAAC
GATATGAATG CTATCCGTGA ATTTGTGGGT CCGGGCATTA TGTATTCGTT TAACACCTTT
TTTCGCCTTG TTTTTGCAAT TGTAGCAATG GTGGCTATTT CCCCATCACT TACCTTTTTT
GCACTGCTAC CAGCTCCGCT TTTAAGTTAT TTAGTCTATA AAATTGGCGC TTCTATGCAA
AAGCGCTCAA AGAGCATTCA AGAGAGCTAT GCCGCCATTA CCAACTTAGT GCAAGAAAAT
ATTGCAGGTA TTCGTGTGGT GAAAAGTTAT AACCGTGAAG CGTTTGAAAT TGAGCGCTTC
CGCTTGTTGA ATAGCGATTA TTATGGAAAA AATTTAGCGC TTGGCAAGCT TCAAGCGCTT
TTTTTTGCAT TTCTGACTTC AATGACGGCA CTTTCGCTGT TGCCGGTTAT TTGGGTTGGT
GGCATGTACG TTGTTGATGG CACTATGACG GTTGGTGGTA TTGCACAGTT TATTGTGTAT
GTAACCATGT TAAGTTGGCC TATTATTTCA ATTGGATGGG TAACAACAAT TATCCAAAAG
GCGGCTACGG CACAGGTGCG CTTACATGAA ATTTTTAGCA TGAAGCCTGA AGTGCATAAG
GATGAAAAAG CTGATGCGTT ACCTCAAAAA GCGACCCTTC GCTTTGATAA TGTTTCGTTC
CACTATGCAG GGCAGGCAGA GCATCCAGTG CTTAAAAGGC TTTCGTTTGA AATTCCCGCA
GGCTCAAAAG TTGCCATTGT GGGGGCTACG GGATCGGGTA AAAGTAGCTT GGTGAACTTA
ATTCCTCGCT TATACGATCC TACCGAAGGA GCTATTACCC TTGATAGATA CGATTTGCGT
ACTATTCCGT TGCAGCATTT ACGTGAAATG GTTGGCTTTG TGCCGCAAGT CAATTTTCTT
TTTTCCGACA CCATTGCCCA CAACATTACA TGGGGTAGTA GGGGTGAGGC GCATGACGAG
GCGGCGGTAG AAGCGGTTAT TGAGGCAAGC AAAATTGCAA TGTTGCATGC TGATGTGGAG
GATTTTCCCG ATCACTACCA TACCATGTTG GGCGAAAAAG GCATTAATCT GTCGGGAGGG
CAAAAGCAGC GAGCTTGCAT TGCGCGTGCG GTGGCTTGGC AACCAAAATT GCTTGTGCTT
GACGATGCGC TCTCGGCTGT AGATACCGAC ACGGAGGCGC GGTTGTTTGA GGCGCTCTTG
CAAAAATTAC CCGATACAAC CATTGTGCTG ATTAGCCATC GCATATCAAC CGTAAAAAAT
TGCGATCGCA TTATGGTGCT TGATCATGGG GAAATTGTTG AAAGCGGTAC GCATGAGGAG
TTGCTTGAGC GTCAGCATTT GTATGCGGAA CTCTACAATC AGCAGTTGCT TGAGGAGGAG
ATTCTTTCGA TGTAG
|
|---|
| Protein sequence | MVSAFAQEHC AIKIPSTLFM KQLLSLKPYL LKYKKNLWSG FFFIVLHNLF AVAAPTFIGK
AVDGMSGALS LSAILTDVGF YFLLTLLGGY FLYLVRQRII VTSRHIEFDL KNNYYQHLQR
LPRSFYNATT TGELISRGTN DMNAIREFVG PGIMYSFNTF FRLVFAIVAM VAISPSLTFF
ALLPAPLLSY LVYKIGASMQ KRSKSIQESY AAITNLVQEN IAGIRVVKSY NREAFEIERF
RLLNSDYYGK NLALGKLQAL FFAFLTSMTA LSLLPVIWVG GMYVVDGTMT VGGIAQFIVY
VTMLSWPIIS IGWVTTIIQK AATAQVRLHE IFSMKPEVHK DEKADALPQK ATLRFDNVSF
HYAGQAEHPV LKRLSFEIPA GSKVAIVGAT GSGKSSLVNL IPRLYDPTEG AITLDRYDLR
TIPLQHLREM VGFVPQVNFL FSDTIAHNIT WGSRGEAHDE AAVEAVIEAS KIAMLHADVE
DFPDHYHTML GEKGINLSGG QKQRACIARA VAWQPKLLVL DDALSAVDTD TEARLFEALL
QKLPDTTIVL ISHRISTVKN CDRIMVLDHG EIVESGTHEE LLERQHLYAE LYNQQLLEEE
ILSM
|
|---|
| |