Gene Cag_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1160 
Symbol 
ID3747916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1554335 
End bp1554880 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content43% 
IMG OID637773694 
Productpyruvoyl-dependent arginine decarboxylase 
Protein accessionYP_379465 
Protein GI78189127 
COG category[S] Function unknown 
COG ID[COG1945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00286] arginine decarboxylase, pyruvoyl-dependent 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCATTTG TGCCAACAAA AGTTTTTTTC ACCAAAGGGG TGGGAAGACA CAAGGAATAT 
CTCTCATCAT TTGAGCTGGC ATTGCGAGAT GCTAAAATCG AAAAATGCAA TTTGGTAACC
GTTTCAAGTA TTTTTCCTCC AAAATGCAAG CGCATCTCGG TTGAAGAGGG TATTAAAGAA
CTTTCACCTG GGCAAATTAC CTTTGCCGTT ATGGCGCGCA ACTCAACCAA CGAATTTAAC
CGCTTAATTG CAGCATCAGT AGGTGTTGCA ATTCCTGCTG ACGATACTCA ATATGGTTAC
CTTTCGGAGC ACCACCCATT TGGCGAATCA GCCGAGCAAT CGGGCGAGTA TGCTGAGGAT
TTAGCTGCAA CCATGCTTGC TACAACGCTT GGCATTGAGT TTGATCCTAA TAAGGATTGG
GATGAGCGTG AAGGTATTTA CAAAATGAGT GGAAAAATTA TCAACTCCTA TAACATTACC
CAATCGGCTG AAGGTGAAAA TGGCATGTGG ACAACGGTTA TTTCATGTGC CGTACTTCTG
CCATAA
 
Protein sequence
MSFVPTKVFF TKGVGRHKEY LSSFELALRD AKIEKCNLVT VSSIFPPKCK RISVEEGIKE 
LSPGQITFAV MARNSTNEFN RLIAASVGVA IPADDTQYGY LSEHHPFGES AEQSGEYAED
LAATMLATTL GIEFDPNKDW DEREGIYKMS GKIINSYNIT QSAEGENGMW TTVISCAVLL
P