Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1135 |
Symbol | |
ID | 3747291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1529044 |
End bp | 1530876 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637773668 |
Product | long-chain fatty-acid-CoA ligase |
Protein accession | YP_379440 |
Protein GI | 78189102 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.420204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTCA TTAATCCCGC ATTTACCACA TTACCTGAGC TTTTTGCCTC AGTTTTTGCT CACTATCGCT CCAACACCAA AGCGTTTCCA GTTTCGCGCA AAATCAATGG CGTTTATACT CCCGTTAGCT ACCAAGCGTT GTATGCCGAT GAGCAAAAAT TGCAAGCCTT CTTAAAGCAG CGAGGCGTTA CGGCAAATGA CCGTGTTGCT ATTTTATCGG AAAATCGCCC TGCGTGGTAC CTTGCCGATA TGGCAATTCT TAATCTTGGC GCCATTACCG TTCCCCTCTA CCCCTCTCTG CCTGCTAATC AAATTGAGTA CATTCTTAAC AACTGTAGCG CTAAAGCCGT TATTGTCTCC AATTCGCTTC AACTCAGTAA AATTCTCTCC ATTCGCAACC AGCTTACTTC ATGCGAATTC ATTGTAATGC TGAATCGGCA AACAGAGCAA ATTGAGGGAG TTACCGATTT AAATCATGCG AAAGAGGAGG GAAAAAAACT ACTTGCGGCT AACCCAAGCT TTCTTACTCC CTCACCCGCT AAACCCGATG ATGTTGCTAC CATTATTTAC ACCTCAGGCA CCACTGGATT GCCAAAAGGG GTAATGCTTA CCCATAGAAA CTTGTGCGAA AATGTAAAAT CGTGCTCAAC GGTGCTTGAG CTAAACGAGA GCGATTGCGC ACTCTCATTT CTTCCACTAT CCCATGCCTA TGAGCGCACA GGCGGTTACT ACCTGCTCTT TGCATGTGGC ACGCAAATTT ACATTGCCGA AAGCATTGAA ACCGTTTCGC TCAATATGAG TGAAGTAAAA CCCACCATTA TTTTTACCGT CCCTCGCCTT TTTGACCGAA TTCGCGCAAT TCTTCTTAAA CAAATAGGAG AACAACCTCC ACCAGCACAA AAGCTCTTTG AGTGGGCACT GCAAACAGGT GAAGAATATT ACCAAGCGCT CAGTTCGTGT GGTAGCGCTC CCCCCTTGCT TGCAATGCAA CACAACCTTG CCAGCCAACT TATCTACAAA AAAATCCACC AAAAAATGGG TGGACGCTTG CGTTACTTTG TTTCGGGTGG AGCTGCTCTG CCTCAAAAAA TAGGGGAATT TTTTCAAGCG CTTGATGTGC CCATTTTGGA AGGATTTGGC TTAACAGAAA CCTCCCCCGT AACGCATGTT AATCGCCCTG AAAAAATTAA GTACGGCACC GTTGGCAAAG CGATTAACAA TGTTGAAACC CGTATTGCAG AGGATGGCGA AATTCTTCTG AAAGGTCCAA ATATTATGAA GGGATATTGG AATGATGAAG AGGCAACACG CGAAGTGCTG AAAGATGGAT GGTTTTACAC GGGCGATTTG GGCGAAATTG ATAGCGATGG CTATTTAAAA ATTACAGGAC GTAAAAAGCA CATTATTGTA ACGTCAGGCG GCAAAAACAT TGCGCCACTG CCTATTGAAA ACCTGATTGC TGAAAATCCT TTTATTGGTC AGGTATTAGT AATTGGCGAA AAACGTCCAT TTCTGGTAGC CTTAATTGTT CCCGCATTTC CCCATTTGCA AGCACATGCT CGCAAAGAGA GCATTCAAGC AACCACCAAT CGTGAATTAA TGGAGCACAA AAAAGTGCAG CAAATTTATG AGGAACTGCT CCGCACCATT TCCATGCAGC TTGCCACGCA CGAAAAAATC CGCAAGTTCA TTTTAATTGA AAATCCCTTC ACCATTGAAA ATGAGCAGAT GACCCCTACG CTCAAGTTGC GTCGCGATGT TATTATTAAC GCCTATGCAA ACGACATTGA AAACGCATAC AATTCATTGA ATATGTGTTA TAACGCCGAA TAG
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Protein sequence | MALINPAFTT LPELFASVFA HYRSNTKAFP VSRKINGVYT PVSYQALYAD EQKLQAFLKQ RGVTANDRVA ILSENRPAWY LADMAILNLG AITVPLYPSL PANQIEYILN NCSAKAVIVS NSLQLSKILS IRNQLTSCEF IVMLNRQTEQ IEGVTDLNHA KEEGKKLLAA NPSFLTPSPA KPDDVATIIY TSGTTGLPKG VMLTHRNLCE NVKSCSTVLE LNESDCALSF LPLSHAYERT GGYYLLFACG TQIYIAESIE TVSLNMSEVK PTIIFTVPRL FDRIRAILLK QIGEQPPPAQ KLFEWALQTG EEYYQALSSC GSAPPLLAMQ HNLASQLIYK KIHQKMGGRL RYFVSGGAAL PQKIGEFFQA LDVPILEGFG LTETSPVTHV NRPEKIKYGT VGKAINNVET RIAEDGEILL KGPNIMKGYW NDEEATREVL KDGWFYTGDL GEIDSDGYLK ITGRKKHIIV TSGGKNIAPL PIENLIAENP FIGQVLVIGE KRPFLVALIV PAFPHLQAHA RKESIQATTN RELMEHKKVQ QIYEELLRTI SMQLATHEKI RKFILIENPF TIENEQMTPT LKLRRDVIIN AYANDIENAY NSLNMCYNAE
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