| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1105 |
|---|
| Symbol | |
|---|
| ID | 3748323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1492029 |
|---|
| End bp | 1492928 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637773636 |
|---|
| Product | bacteriochlorophyll/chlorophyll a synthase |
|---|
| Protein accession | YP_379410 |
|---|
| Protein GI | 78189072 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01476] bacteriochlorophyll/chlorophyll synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.359039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATCG AACCTCTCTC TACCATTGCG CTTATTATTC GCTTTCTTAA GCCTGTAACG
TGGATTCCCG TTATATGGAG TTTTCTTTGC GGAGCAGTTG CAAGCGGTGC TTTTGGGTGG
CATGACATCT TGGGTGCAAA ATTTCTCCTC GGTATGTTGC TAACTGGTCC GCTTGCCAGC
GGTACCTGCC AAATGTTGAA CGACTATTTT GATCGCGATC TCGATGAAAT TAACGAGCCA
AATCGCCCAA TACCAGGCGG TAGCATTTCA CTAAAAAATG CCACCATTTT AATCAGCATC
TGGGCAGTGC TCTCGGTTAT TGTGGGCTAT TTGATTCATC CCCTGATTGG CTTGTATGTG
GTGATTGGAA TTATTAATGC ACACCTCTAT AGTGCCAACC CAATCAAACT GAAAAAGCGC
CTTTGGGCGG GCAACACCAT TGTTGCCGTC TCCTATCTTA TTATCCCATG GATTGCAGGC
GAAATTGCCT ACAACCCACA AGTTACCCTT GCGTCGCTTC AGCCATCGTT GATTGTTGCA
GGATTTTTCA CCCTCTCCAG CATTGGCACC ATGACCATTA ACGACTTTAA ATCCATTGAG
GGCGATCGGC AGGTGGGCAT TCGCACCTTG CCAGTGGTGT TTGGCGAACA ACGAGCAGCT
ACCATTGCGG CAGTACTCAT TAATCTTGGG CAACTCTTTG CAGCCATCTA CATGGTGCTG
ATTGGGCAAC CAACCTACGG CATTGTGGTA GCAGCGCTTA TTCTCCCCCA ATTTTTCTTG
CAATTCCCCC TTATTAAAGA ACCTGCACAA TGGGATGTGC GCTACAACGC AATTGCACAA
AACTTTCTTG TTGCCGGCAT GTTAGTTTGT GCATTTGCCA TTCAAGCAGC ACGCTTATGA
|
|---|
| Protein sequence | MPIEPLSTIA LIIRFLKPVT WIPVIWSFLC GAVASGAFGW HDILGAKFLL GMLLTGPLAS
GTCQMLNDYF DRDLDEINEP NRPIPGGSIS LKNATILISI WAVLSVIVGY LIHPLIGLYV
VIGIINAHLY SANPIKLKKR LWAGNTIVAV SYLIIPWIAG EIAYNPQVTL ASLQPSLIVA
GFFTLSSIGT MTINDFKSIE GDRQVGIRTL PVVFGEQRAA TIAAVLINLG QLFAAIYMVL
IGQPTYGIVV AALILPQFFL QFPLIKEPAQ WDVRYNAIAQ NFLVAGMLVC AFAIQAARL
|
|---|
| |