Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1089 |
Symbol | |
ID | 3747956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1470466 |
End bp | 1471119 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637773620 |
Product | peptidyl-tRNA hydrolase |
Protein accession | YP_379394 |
Protein GI | 78189056 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACATT GCCGCCATGC TTGCAAACAA CAAAAGCGTG TGAAAATTAT TTTACCATTA ACCTCCTTTT TTTCGATAGT TATGAAACTG ATTATAGGGC TTGGCAACCC CGGCACTGAA TATGATGGCA CTCGCCACAA CATTGGCTTT GCCGTTGCCG ATGCTCTTGC CGCTCACCAC AACGCCTCTT TCAGCAAAGA AAAAGGGCGC TACCTCTCCG CCAAAATTAA GCTTGGTAGC GAATCTGTCG GCATTATTAA GCCCATGACC TACATGAACC ACTCAGGGCA TGCCGTTGTT GCTGCCATGA ATTTCTATAA AGTTGCTCGC ACGGAAATTG TGGTGATATG CGACGATCTG AATTTACCGG TGGGCACCAT GCGTTTGCGC CCAAAAGGAT CGGCTGGTGG GCAGAATGGC TTAAAGCATA TTATTGAATG CTTTGGCAGC AACGAATTTG CTCGCCTTCG TATTGGCATT GGTAGTCAAA ACATGCCAAA AGGCGGGTTC TCATCATTTG TATTGGGGAA ATTTAGTGAG CAAGAAAAAA GCGAAATAGC CATTATGACC GTTTCGGCGC GTGATTGCGC CATTGATTTT GCGCTTCACG GTTTAGGGCA CGCCATGAAC CACTTTAACA CCTCAAAGCT GTAA
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Protein sequence | MLHCRHACKQ QKRVKIILPL TSFFSIVMKL IIGLGNPGTE YDGTRHNIGF AVADALAAHH NASFSKEKGR YLSAKIKLGS ESVGIIKPMT YMNHSGHAVV AAMNFYKVAR TEIVVICDDL NLPVGTMRLR PKGSAGGQNG LKHIIECFGS NEFARLRIGI GSQNMPKGGF SSFVLGKFSE QEKSEIAIMT VSARDCAIDF ALHGLGHAMN HFNTSKL
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