| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1042 |
|---|
| Symbol | |
|---|
| ID | 3747770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1410353 |
|---|
| End bp | 1410823 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637773571 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379347 |
|---|
| Protein GI | 78189009 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4704] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0670171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TATCACTCTA TTTGACCGCT TTATTGCTTA CTGTTGCAAC ACCACTTCAC
GCTGAAGAGG AGCAAGTGTG TACCACACAA GCCGACCAAA AAGGTTCGCT TACAATAACC
ATTACTAACT TTCGCGCCAT TAAAGGCTCG CTTGGCATTT CCCTTTACAA CACCAAAAAA
GGCTTTCCAT CGGGCTATGA ACAGGCATAC GCCAACCAAA TTAAAAAGGT GAATGGCAGC
TCCGAGTGTG TTACCTTTCA AAACATCCCT TATGGCGTGT ATGCTGTAAG CGTGGTGCAC
GATGAAAATG AAAATGGCAA GCTTGATACC ACCTTTATTG GCATTCCAAA AGAAGGAGTT
GGTGCTTCAA ATAATCCTAA AATGAGTTTT GGTCCACCCT CTTTTAACGA TTCAAAAGTG
CTGCTTAATA AAGATGTACT TGAAGTAATG GTTTCAATGA AGTACTTTTA A
|
|---|
| Protein sequence | MKKISLYLTA LLLTVATPLH AEEEQVCTTQ ADQKGSLTIT ITNFRAIKGS LGISLYNTKK
GFPSGYEQAY ANQIKKVNGS SECVTFQNIP YGVYAVSVVH DENENGKLDT TFIGIPKEGV
GASNNPKMSF GPPSFNDSKV LLNKDVLEVM VSMKYF
|
|---|
| |