Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0860 |
Symbol | |
ID | 3747570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1192034 |
End bp | 1193554 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637773389 |
Product | Fe-S type hydro-lyase tartrate/fumarate alpha and beta region |
Protein accession | YP_379168 |
Protein GI | 78188830 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0061897 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAAT TTAAAGCTTC AATGCTTGCG CTTATTACCG AAACTTCAGC GAATCTGCCA AGCGACATTC GCCGTGCTCT TGCGGCGGCT ATTCAGCGTG AAGATGCGGC TTCGCAAGCT GGGCTTGCCA TGTCAACCAT TTCGGTAAAT ATTGATATGG CAGTTGACAA TATTTCGCCC GTCTGCCAAG ATACAGGAAT GCCAACCTTT TTTATTCACA TCCCAAAAGG GGTGGATATG CTTCCATTGA AGCGTGATAT TGAGGAAGCT ATTGCAGAGG CATCAAAAAC AGGGAAACTT CGTCCAAATG CGGTTGATGC AATCAGTGGT AAAAATTCGG GCAACAACCT CGGCGAGCAT GTGCCCGTTA TTCATTTTGA GCCTTGGGAT AAGGATGAAA TTGAAGTAAA GCTCATTTTA AAAGGTGGTG GATGTGAGAA TAAGAATATT CAATACTCAT TGCCGCAAGA AATTCCCGGA CTTGGTACTG CTTCGCGCGA TTTGGAGGGA GTGCGCAAAT GCTTGCTCCA TGCAGTATAT CAAGCACAAG GGCAGGGATG TAGCCCCGGC GTGATTGGCG TTGGCGTTGG TGGCGATCGT ACCAGCGGTT TTGAGCTTGC TAAAAAGCAG CTTTTCCGTA TGCTCGACGA CCGTAATCCC AACAGTGAGC TGGATGCGCT TGAGCAGGAG ATTATGGAAA AAGCCAATAA CATGAATATT GGACCCATGG GTTTTGGTGG CAAAACAACG CTGCTGGGCT GCAAAATTGG TATGTCGCAC CGTGTGCCAG CAAGCTTTTT TGTTTCAGTA GCCTATAACT GCTGGGCATA CCGTCGTCTT GGCGTTCTCA TTGATCCTGC AACGGGAGCA ATTACCCATT GGCACTATCG TGAGGCGGAT GAAATTAAGC GTATGGCACA AGGCGAGGGA ATGCCGCTTA CGGGACGTGA AGTTGTGTTG CAAGCGCCTG TAACCGAAGA GCAAGTGCGC AGCTTAAAGG TTGGTGATGT GGTGCTGGTT AATGGCACCA TGCACACAGG GCGCGACGCT TTTCACCACT ACATTATGCA CCACGATTTA CCCGCTGGGC TTGATACAAA CGGAGGTATT TTGTTCCATT GCGGTCCCGT CATTATGAAA AACGAGGATG GCAGTTACCG CGTAACCGCA GCAGGTCCAA CAACCTCCAT TCGCGAAGAG CCATTCCAAG CCGATGTTAT TAAAAAGCTT GGTTTGCGCG TTGTGATTGG TAAAGGCGGT ATGGGTCCAA AAACTTTGGC TGGCTTACAA GAGCATGGCG CAGTTTACTT GAACGCTATT GGCGGCGCTG CTCAATATTA TGCACGTTGC ATTGAAAAAG TTACAGGCGT TGATTTTCTT GAAGAGATGG GCGTTCCTGA AGCCATGTGG CATTTTGAAG CAAATTCATT CCCTGCCATT GTAACAATGG ATGCACATGG CAATAGTTTG CATCAGCAAA TTGAAGAGGA GTCGTTTAAC GCTCTTGCTT CTTTTAAATG A
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Protein sequence | MEQFKASMLA LITETSANLP SDIRRALAAA IQREDAASQA GLAMSTISVN IDMAVDNISP VCQDTGMPTF FIHIPKGVDM LPLKRDIEEA IAEASKTGKL RPNAVDAISG KNSGNNLGEH VPVIHFEPWD KDEIEVKLIL KGGGCENKNI QYSLPQEIPG LGTASRDLEG VRKCLLHAVY QAQGQGCSPG VIGVGVGGDR TSGFELAKKQ LFRMLDDRNP NSELDALEQE IMEKANNMNI GPMGFGGKTT LLGCKIGMSH RVPASFFVSV AYNCWAYRRL GVLIDPATGA ITHWHYREAD EIKRMAQGEG MPLTGREVVL QAPVTEEQVR SLKVGDVVLV NGTMHTGRDA FHHYIMHHDL PAGLDTNGGI LFHCGPVIMK NEDGSYRVTA AGPTTSIREE PFQADVIKKL GLRVVIGKGG MGPKTLAGLQ EHGAVYLNAI GGAAQYYARC IEKVTGVDFL EEMGVPEAMW HFEANSFPAI VTMDAHGNSL HQQIEEESFN ALASFK
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