Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0828 |
Symbol | |
ID | 3746827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1154285 |
End bp | 1156732 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637773358 |
Product | primosomal protein n |
Protein accession | YP_379137 |
Protein GI | 78188799 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000150971 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGCAC GCTGTGTTGC TGATCGCTTT TTTAGGGGTG AACCCTTTAG CTTGGTAGTG CCTGAAGCTT TTTGCGAAGA GCTGCAAGCA GGCTGCATGG TGCTCTTGCT TTCGCTAAAA GGGCAGGGAT TAATGAGCAT TGGCTATGTG CTCAGTTTGT CGCCCGATGC ACCGCCCGAC ATGGTTAATG AGGAGCTGCC AAGCTTTGAA ATGGTTGACC TGCTCAATGG CAGCCAACCT GTACTTAACG GTGAACTGCT GAAGCTTACA AGCTGGATTG CCGATTATTA TTTGACGCGC CCAATTGATG CCATTCACAC AGCTCTTCCT GTTGCCATTC GCACCACCGT ACACGACGTG GTTGAAGCTG CTGGTTTTAC TTTGCAAGCC GAACCCACAA AGGTGATGAA CACCGCCTTG CGCCGCTCGA TTCTCAAGCT GCTTGCCACC AACAAGCAAT TAACGGTAAC ACAGCTCCAA CGGCGGCTTG GTAAAAAGCA ACTCTACAAA ACAATCTCAC AGCTTGAAAA AGGTGGCTAT CTTACCCTTT CCAAAAAATT TTCAACCAAA AAGCCAAAAT ATAAAAGCGC TTACCGCTTA ACCGCTCCCT TGCAAGACGG GGTGTTGGAA AGTGTTGCAA GCGCTAAAAA ACAGCACGCC ACCCTAAGCA CGCTTGCCGA TCTTTATCCC GAAACGGCAT TTCTTAACGA GTTAGAGGTA TCACACGCCG TAATACAAGT GCTGCTTAAT AAGGGATTGG TGGAAAAAGT GCAAAAGCGC ATAGAGAGCA ACTTTTCAAG CGGCTACCGC GAAAGCGCAC AACCGGCAAA AAAGCCTACC GCACAGCAGC AAAAGGTGCT AAACGAATTG TGCAGCGCTT CGCGCCAAGG GCATTACCAA ACCTTTTTAC TACACGGTGT TACGGGCAGC GGTAAAACCT TGGTTTACAT TGAATTTTTA AAGGAGGTGC TTGCTGCAGG GAAAACGGCT ATTGTATTAG TGCCCGAAAT AGCTCTAACA CCCCAAACCG CGGGACGCTT TCGCGAGCAT TTCCACCACG ACATTGCTAT TCTCCATAGC GCTATGAGCT TGCAAGAAAA GTATGATGCG TGGCATAGCC TCAAAAGCGG ACGCTGCCGC ATTGCGCTTG GTGCCCGCTC TACCCTTTTT GCTCCACTTG AAAATCTTGG TGCCATTATT GTTGACGAAG AGCACGATGG CGCTTATAAG CAAGATCGCT CACCCCGCTA CCACGCCCGC GACACCGCCG TTATGCGTGC TATGCTTAGC AACGCCATTT GCTTGCTTGG CTCGGCAACT CCCTCGTTTG AATCGTACCA AAATGCACAA AACGGCAAGT ACCATTTGCT GCGGATGGCA GAGCGCATTG ATGGCGCAAC CATGCCCACC ATCAGCTTAA TTTGGATGCG CGAAAGCCCC CGCCGCACCA CCTCAATTTC GGAAATGCTT TACCAGCAGA TTGCCCAACG CATCGAAAAA AACGAACAGG TGATTTTGCT TCAAAACCGT CGCGGCTTTG CGGGCAGCAT TCTCTGCCTT GAATGCGGGC ACATTCCGCT CTGCCCCCAC TGCAACATTC CATTGGTATA TCACGCCACC CACAACCACC TGCGCTGCCA CTATTGCGGG CACACCGAGC GCTACAAAGC AATGTGCAGC GCCTGCAAAT CCACAGGGCT TTTTTATAAA GGAAGCGGCA CCGAACGCAT TGAAGAGGAG TTGCAAAAGC TCTTTCCCGA CGAAAAAATT CTCCGCATGG ATGTTGACAC CACCGCTAAA AAAGGAGCGC ATGGACGCAT TTTGCGGGAA TTCCATGAAC GCAAAGCACG CATTTTGCTT GGCACACAAA TGGTAGCAAA AGGGTTGGAC TTTCCTGCCG TAACGTTAGT TGGAGTGCTT ATGGGCGATA TTGGCTTAAA CATCCCCGAC TTTCGTGCAT CGGAACGCAC CTTTGCGCTC TTAATGCAAG TTGCAGGACG AGCAGGACGA GCCGCTATAC CGGGCGAGGT GCTCATACAG GTTTACAATA AGGAGAGTGA TGTTTTTACC GCTTTGCTGC ACGGAGATTA CGAACGCTTT TTTCAGCAAG AGCTTGAAAG CCGCCGCACC CTGCTTTACC CACCAGCCGC CCGCTTAATT AAGTTTGAAT GCTCCGCTGA TGATGAAGTG CAAGCTGAAG CGGCTGCGAC TTTTTGCAAA GAAATTGTGC AGCAGCACCT CCCTGAAAAA CAAGGCATGG TGCTTGGTCC AGCACCTGCT TGCATTGCTA AAATCCGCAA CCGTTTTCGT TACCACGTTC TTGTAAAGTT GATGCTCGGC AAACTCTCCC CGCTTTTTAT TCGCGAAATG AGCGACACCA TCCACAGCCG CTTTCGCTCC GCCAATGTGC TGCTTACCGT AGATGTTGAT CCGCAGAGTT TGATGTAG
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Protein sequence | MYARCVADRF FRGEPFSLVV PEAFCEELQA GCMVLLLSLK GQGLMSIGYV LSLSPDAPPD MVNEELPSFE MVDLLNGSQP VLNGELLKLT SWIADYYLTR PIDAIHTALP VAIRTTVHDV VEAAGFTLQA EPTKVMNTAL RRSILKLLAT NKQLTVTQLQ RRLGKKQLYK TISQLEKGGY LTLSKKFSTK KPKYKSAYRL TAPLQDGVLE SVASAKKQHA TLSTLADLYP ETAFLNELEV SHAVIQVLLN KGLVEKVQKR IESNFSSGYR ESAQPAKKPT AQQQKVLNEL CSASRQGHYQ TFLLHGVTGS GKTLVYIEFL KEVLAAGKTA IVLVPEIALT PQTAGRFREH FHHDIAILHS AMSLQEKYDA WHSLKSGRCR IALGARSTLF APLENLGAII VDEEHDGAYK QDRSPRYHAR DTAVMRAMLS NAICLLGSAT PSFESYQNAQ NGKYHLLRMA ERIDGATMPT ISLIWMRESP RRTTSISEML YQQIAQRIEK NEQVILLQNR RGFAGSILCL ECGHIPLCPH CNIPLVYHAT HNHLRCHYCG HTERYKAMCS ACKSTGLFYK GSGTERIEEE LQKLFPDEKI LRMDVDTTAK KGAHGRILRE FHERKARILL GTQMVAKGLD FPAVTLVGVL MGDIGLNIPD FRASERTFAL LMQVAGRAGR AAIPGEVLIQ VYNKESDVFT ALLHGDYERF FQQELESRRT LLYPPAARLI KFECSADDEV QAEAAATFCK EIVQQHLPEK QGMVLGPAPA CIAKIRNRFR YHVLVKLMLG KLSPLFIREM SDTIHSRFRS ANVLLTVDVD PQSLM
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