Gene Cag_0789 details

Gene Information

• Locus tag: Cag_0789
• ID: 3748074
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 1107977
• End bp: 1109962
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637773319
• Product: periplasmic sensor hybrid histidine kinase
• Protein accession: YP_379098
• Protein GI: 78188760
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGCA GAGTACCAAA AGGCTTGCCT GTCCCACAAG TTAGCACCAA CCAACCGTTG 
CCCGTAGTTC CTGTTGCGGT ATTACCAGGT ATTTATTTTG TGCAGTCTTT TGCGGGTAAG 
GTGTTAATGG GCAATGAGCG TTTTTCGCAA TGTGTAGCTC ATAGCCAGCA CGATAAGTTA 
CTTGGTGTTA CCGCATATAA CCTTATTCAT ACAAGGGATC ACCCAATTCT CCAAGATGCG 
TTGGAAAAGG TTACTCTGTA TGAACAATCG GTAAGTATTG AGGTTCGTTT GAATTTTCTT 
ACCTCTGAAA ATGCTTTTTG GTATCTCTTT ACGGTTTCTC CTCTTACGCT AAACGGTGTT 
GCTTGTTTTC AATTTGTGGG AATTGATATT ACAGAACGCC TATACAGCAA TCGTTTAAAG 
CATTTTATAG AAAGTATTTC TACCGTAAAT AAAACTATCA GCGATGAAGT TTTAATTCAG 
CAATTATTGG ATGTAGCTGA GTTGTTAACA GGAAGTAGTT GCTCCTATTG TTATCAATGC 
GAAACGTTAG AAAAAAATCA GTTGATTCTT TCTGCCTCAA CCCAACAATT CATTCAAGAA 
CATGAAATTT CTTTACTTTC ATGGCAGACG AATAACGAAG GTATTTTAGA GTATTGTCCC 
TCTGCAACCG TTGCTGACCA GCTTTCGGAT GTGCTGTTGC TTAATACAAC ATTTCACCGA 
CGCTTACTCT TTCCAATTAA TGATTCAGCG CCAACTACGG CTTTTGTGTG TGTTGGCAAT 
AAGCTATGTT CTTACACGGA GGATGATCGC AATTATCTCG ATCAACTTGT TGAGTGTTTG 
TGGAGCTTTT TTGCACAACG CAATAAAGAG CAAACACAAA CTCATGTTAA AGCCCTTTTA 
GAGCGTACTG TACAGCAAAC CACGTTGTGC CGTATAACTG ACATGGTTGG CGAAGAAATA 
GCTCATCTGC TGATCTCATT GCGGAGTCTT ATACAAAATA GTTCGCAAGA GCAAGGGTTA 
GAGGCATCAC TACACGCTTC GGCAGCTCAA GCGATTGATG CGGTTAAAGG GCTTACAACA 
TTTCAGCAAG ACCTCTTCTC TTTAATACAT ATTAATGCTG AACACCTTAT GACGGTTGAT 
GCGTATGATA CTCTTGATGC GTTAGCTGGT ATTGTGCAAA ACGAGCTGGA TTGTATTATT 
GAGGTTGAAT CAGATTTTAA GCACTTCTCT CCACTCATTC AGATTGATCC ACTTCATTTA 
AAGCGGGTTA TTACGATTCT GTGTGAAAAT GCGCTTGAGG CTATGCTCTT TAGTAAAACA 
ATTACGATTC GGCTAAGCCC AGATGTTACG TTCGAGCAAG AGAGTTTACA GCCATTGCAG 
CCCATGCTTT CTATTGCGGT GCACGACACC GGAGTTGGCA TAGCACCGCA TATAATACCA 
CATATGTTTG AGCCATTTTT TACCACTCAT GGTGAAGAGG GCAAGCGAGG AATCGGGTTA 
ACAATTGCCA AGCGACTTAT GCACTTACAT AACGGCGATA TTGTTTGTAG CAGTTCTGAG 
GAGGGGGAGA CCATTATAAC GCTAACGTTG CCAATGCTCT ATGAAAAAGA GCTTTTAGAG 
CATAGTACAA AAATGGATTC ATTGGTGCTT ATGGTAATTT CGGATGTATC CGTGCTTGCT 
ATGCTTTCGT TATTACTCGA AACTCACGGA TATGGACTAT TGATTGCCAA TAGTGTAGAG 
GATGCCTTAG AATTTGCTGA AACATACAGC AACTCTATTA ACATGCTTGT TACAGAAACT 
CATTTACCTG AATGTAGTGG AAGTGAGCTT GCGGCTTTGT TGTTAGCAAA CCAGCCCTTT 
ATGAAAGTTC TTTATCTTGC AGCTTCTACC CCTACGATTC AGACCGACAA GAATAACGGT 
ATGATTATGT ATCCACCATT TTCAGGATAT GATGTGCTTG ATATGTTGGA AGCACTATCT 
TCTTAA 

 

Protein sequence

MKSRVPKGLP VPQVSTNQPL PVVPVAVLPG IYFVQSFAGK VLMGNERFSQ CVAHSQHDKL 
LGVTAYNLIH TRDHPILQDA LEKVTLYEQS VSIEVRLNFL TSENAFWYLF TVSPLTLNGV 
ACFQFVGIDI TERLYSNRLK HFIESISTVN KTISDEVLIQ QLLDVAELLT GSSCSYCYQC 
ETLEKNQLIL SASTQQFIQE HEISLLSWQT NNEGILEYCP SATVADQLSD VLLLNTTFHR 
RLLFPINDSA PTTAFVCVGN KLCSYTEDDR NYLDQLVECL WSFFAQRNKE QTQTHVKALL 
ERTVQQTTLC RITDMVGEEI AHLLISLRSL IQNSSQEQGL EASLHASAAQ AIDAVKGLTT 
FQQDLFSLIH INAEHLMTVD AYDTLDALAG IVQNELDCII EVESDFKHFS PLIQIDPLHL 
KRVITILCEN ALEAMLFSKT ITIRLSPDVT FEQESLQPLQ PMLSIAVHDT GVGIAPHIIP 
HMFEPFFTTH GEEGKRGIGL TIAKRLMHLH NGDIVCSSSE EGETIITLTL PMLYEKELLE 
HSTKMDSLVL MVISDVSVLA MLSLLLETHG YGLLIANSVE DALEFAETYS NSINMLVTET 
HLPECSGSEL AALLLANQPF MKVLYLAAST PTIQTDKNNG MIMYPPFSGY DVLDMLEALS 
S