| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0757 |
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| Symbol | cobD |
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| ID | 3747604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1065780 |
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| End bp | 1066745 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637773289 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_379069 |
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| Protein GI | 78188731 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.463156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAACCT ATCATTTTAT GCAGAGTGAA TTGCTGCTGC TTGTAGCGTT TGTGCTTGAT
TTACTTATTG GCGACCCACG CTGGTTGCCG CATCCCGTAC AAGGGATTGG TTGGTTTGCA
TTGCAGGTGG AGCGTTGGCT TCGGCGCACA CCTTTGCCAC TTCGTTTGGC GGGCGTTGTG
GCTATGCTGC TGGTAGTTGG CGGTACTGCA ACCCTTGCCT TCTTTAGCAT TACCTTGGCA
ACCATGTTTC ATCCAATAGC AGGCGTTGCC GTGTCGCTTT ACTTGCTTTA CAGCTCCTTT
GCCGTCAAAG ATTTGGGCGA CCATGCTGAA GCGGTTCGCC AACCTCTTGC GGCGGGTAAT
ATTGAAGCGG CTCGCCACAG GGTTTCATAC ATGGTTGGGC GCGATACGGC GGCTCTTACG
GCTGAGGGTA TTGCGCTTGC TGCTACCGAA AGTGTTGCCG AAAACAGTGT TGATGGGGTA
ACGGCACCTC TTTTTTACGC CATTCTTTTT GGTCCAATCG GAGCTATTAC CTACAAAGCC
ATTAACACGC TTGATTCGAC CTTTGGCTAT AAAAATGAGC GTTACCTCGA ATTTGGATGG
GCATCTGCCC GCCTTGACGA TTTTGCAAAT TATCTACCCG CCCGCTTAAC CGTGCTTGCG
GTGGCGCTTG CAGCGGCGCT GAGTCGTCTT CGGGTTGCTG ATGTGTTTCG TGCGGTTCGA
GAAGGCGCTC ATTTACATGC AAGTCCCAAT GCGGGTTATC CCGAATGCGC TTGTGCTGGA
GCGCTTGGGG TTACTTTTGG CGGGGCACGA AGCTACGGGG GCGAAGTGCA CAACGCTCCG
TTGCTTGGCA TTCGTGCTGC CACCTGCACG CCCCAAACTA TCAAGCAGTG CATTCGCTTA
ATGCGCCTAA CGGCTTTTAT TTTCCTGCTT GTGGGCATTG GGGTGAAAAT GGTTATTGCT
GGATAA
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| Protein sequence | MITYHFMQSE LLLLVAFVLD LLIGDPRWLP HPVQGIGWFA LQVERWLRRT PLPLRLAGVV
AMLLVVGGTA TLAFFSITLA TMFHPIAGVA VSLYLLYSSF AVKDLGDHAE AVRQPLAAGN
IEAARHRVSY MVGRDTAALT AEGIALAATE SVAENSVDGV TAPLFYAILF GPIGAITYKA
INTLDSTFGY KNERYLEFGW ASARLDDFAN YLPARLTVLA VALAAALSRL RVADVFRAVR
EGAHLHASPN AGYPECACAG ALGVTFGGAR SYGGEVHNAP LLGIRAATCT PQTIKQCIRL
MRLTAFIFLL VGIGVKMVIA G
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