Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0562 |
Symbol | |
ID | 3747509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 665033 |
End bp | 666031 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637773096 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_378878 |
Protein GI | 78188540 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAGA ATACGCCACT TTCCAACGAC TTAGCTCTTT TACGCGCTCA AGCTGAAGAG CTGCTGACGA AAGGGCAGCA ACAGCTCTCC GATCCCTCTA TTTCACCCGG TGATATGCAG CGAATTCTGC ATGAATTAGC GGTACATCAA ATTGAGTTAG AAATGCAACA AGAACAACTG TTGCAAGCAC GCGTTGAGTT AGAAGAGAGC ATTGAGTGCT ATACCGAACT CTACGATTTT GCTCCGCTTG GCTATGTAAC CTTGAGCCGC AATGGAACCA TACAACAAGT TAATTTAACA GCAACAAAAT TATTAGGCAT TGAGCGTTCT CGATTGGTAG GCGATTATTT TGGGCGCTTG ATAGTAGCGG AAGATATAAA GGCATTTCAA GCCATGCTTG AACAAGTTTT TGTGCAGCAA AAGCACACCT CATGCGAAGT AAAGCTCTTT AACACCCGTC AGCAATCCAC CTCTCCGCTG TTGCCCTCGC CAGCCCACAA CGAAACATTG CCCCACACCA TTCGTATTGA TGCCGTGCTA AGCACTGATG GTGAAGAGTG CAGCGTTGTG GTGTCGGACA TTAGTATGCA AAAACAAATT GAGCGCGAAA ATCAAGCTTT GAAAGAGCAA CTCAATCAAA CATTACTCCC TGAGCTTACA CCAAATGAAA TCACTAACAG TGAGATTGAT GACAACAATG CCGCCGATTT TAATCATGCC TTACTCGACA AAGTAATTCA TTCACGCATT CGCTTTGCCA TACTCTCCTA TCTCAGTACG GCAGGCAAAG CCTCATTTGT TACCATAAAA CGGCAGATAA ATACCACCGA TGGCAACTTA AGCGTTCATT TACGAATGCT TGAATCCGCC GCTTATGTGA GTTCCGACCG CGAAATAAAT GAGAACAAAA TGCAAACAAC ACTATACACC ATTACTGAAG CGGGTAACCA TGCCTTGCAA GCCTATAAAC GGCAACTCCG TGCATTTCTT GGGCTGTAA
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Protein sequence | MIKNTPLSND LALLRAQAEE LLTKGQQQLS DPSISPGDMQ RILHELAVHQ IELEMQQEQL LQARVELEES IECYTELYDF APLGYVTLSR NGTIQQVNLT ATKLLGIERS RLVGDYFGRL IVAEDIKAFQ AMLEQVFVQQ KHTSCEVKLF NTRQQSTSPL LPSPAHNETL PHTIRIDAVL STDGEECSVV VSDISMQKQI ERENQALKEQ LNQTLLPELT PNEITNSEID DNNAADFNHA LLDKVIHSRI RFAILSYLST AGKASFVTIK RQINTTDGNL SVHLRMLESA AYVSSDREIN ENKMQTTLYT ITEAGNHALQ AYKRQLRAFL GL
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