Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0448 |
Symbol | |
ID | 3747373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 525533 |
End bp | 526738 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637772981 |
Product | DegT/DnrJ/EryC1/StrS family protein |
Protein accession | YP_378764 |
Protein GI | 78188426 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.733493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGCTGCC GAGATAGTAC AGAAAAAAAT GAAATGGTTG TTTATTTTGT GCGCTCTTAT TCTTTCCATT TAGACCGACA ACATATTATG CAATTTATTG ATCTGCTCAC CCAAAAAGAG CGCATTAAAG GCGCTTTGCT TCGCCGCTTT GAGGATATTC TTGATCGCGG ACAATTTATT ATGGGTCCCG AAGTTACTGA GTTGGAAGCG CAACTTGCGG CGTATGCTGG CACGCGCCAT TGCGTCTCGT GCTCGTCGGG CACCGATGCG CTCTTAATGC CGCTGTTAGC AAAAGGCATT GGCGCGGGTG ATGCCGTTAT TACCACACCA TTTACCTTTG TTGCCACAGC GGAGGTTATC AATTTAGCGG GTGCAACGCC AATTTTTGTG GATGTGCTGC CCAACACCTT CAACATCAAT CCTGAGCTTA TTGGCGAAGC AGTTGCAGAG GCAAAGCAAA AAGGGCTTCA GCCAAAAGCC ATCATTCCCG TTGATTTGTT TGGCTTGCTT GCCGATTACG AACGCTTAAA TGCCGTTGCT AATGAACACC ATTTGTGGAT TTTAGAAGAT GCCTGCCAAA GTTTTGGGGG AAGTTTTAAT GGAGGCAAAG CAGGAAGTTT TGGATTGGTT GGCGCAACCT CATTTTTCCC TGCAAAACCG CTTGGTGGCT ATGGCGATGG TGGCGCAATT TTTACCGATG ATAGTGAGCT TGATATGCTG CTGCGCTCGG TGCGGGTTCA CGGCAGTGGT GCCGATAAGT ACAGCAACGA TCGCATTGGT ATTAACGGAC GGCTTGATTC GTTGCAAGCG GCTGTGTTGC TGGAAAAATT GACCATTTTT GATGAAGAGC TTGCCACGCG CCAGAGCATT GCTGAAATCT ACAATGAACG GCTTGATGAG CGTTTGGTCG TGCCAACCAT CCCCGATGGC TACCGCTCAG CATGGGCACA ATACTCGGTA CTTGCCGCTT CGGCTGAGGA GCGCGATATG CTTATGCAAG CGTTGCAGCA AGAAGGCATT CCATCCATGA TTTATTACAA AATCCCGCTC CACCTCCAAA AAGCCTACCG CTCTCTTGGC TACAACACCA GCGACTTCCC CGTTTCGGAA GATTTAAGCC GCCGCATTTT CTCTCTCCCT ATGCACCCAT ATTTGAAGGA TGAGGAGATT GAGCAAATTT GCACCGTTCT TTTGCAAACA AAGTAA
|
Protein sequence | MCCRDSTEKN EMVVYFVRSY SFHLDRQHIM QFIDLLTQKE RIKGALLRRF EDILDRGQFI MGPEVTELEA QLAAYAGTRH CVSCSSGTDA LLMPLLAKGI GAGDAVITTP FTFVATAEVI NLAGATPIFV DVLPNTFNIN PELIGEAVAE AKQKGLQPKA IIPVDLFGLL ADYERLNAVA NEHHLWILED ACQSFGGSFN GGKAGSFGLV GATSFFPAKP LGGYGDGGAI FTDDSELDML LRSVRVHGSG ADKYSNDRIG INGRLDSLQA AVLLEKLTIF DEELATRQSI AEIYNERLDE RLVVPTIPDG YRSAWAQYSV LAASAEERDM LMQALQQEGI PSMIYYKIPL HLQKAYRSLG YNTSDFPVSE DLSRRIFSLP MHPYLKDEEI EQICTVLLQT K
|
| |