| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0343 |
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| Symbol | |
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| ID | 3748025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 388095 |
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| End bp | 390290 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637772870 |
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| Product | photosystem P840 reaction center, large subunit |
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| Protein accession | YP_378659 |
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| Protein GI | 78188321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000249067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAC AAGTAAATCC GGCAGGAGTA AAGCCAAAGG GGACTGTCCC ACCTCCCAAG
GGGAATGCTC CTTCTCCAAA AGGGAATGGG GCTGCGGGTG CTCCATCGGT CATCAAGGAG
CAAGATGCCG CTAAAATGAG ACGATTTTTG TTCCAGCGAA CAGAAACGCG CTCAACAAAG
TGGTATCAAA TTTTTGATAC CGATCGAGTT GACGATGAGC AAGTGGTTGG AGCCCACCTT
GCTTTATTGG GCTTTCTAGG TTATCTCATG GCAATTTATT ACATCTCGGG AGTTCAAGTA
TTTCCGTGGG GTGCACCTGG TTTTCAGGAC AACTGGTTTT ATTTGACGAT TAAACCTCGC
ATGGTGTCGT TAGGTATTGA TACCTACAGC ACGAAAACTG AAGACTTGCA ATGGGCTGCA
TCCAATTTGC TTGGATGGGC ATTATTCCAC ATTATTTCGG GTTCGATTCT GATTTTTGGT
GGATGGCGCC ATTGGACGCA TAACTTGACC AATCCGTTTA CGGGTCGTGC AGGTAACTTC
CGCGATTTCA GATTCCTTGG TAAGTTTGGT GATGTTGTAT TCAGTGGCAC AAGTGCAAAA
AGCTACAAAG ATGCTCTTGG ACCTCATACT GTGTACATGT CGCTGCTTTT CCTCGGATGG
GGTTTTGTGA TGTGGTTTGT TTTGGGATTT GCTCCAATTC CTGATTTTCA GACCATCAAC
TCCGAAACAT TTATGTCGTT TATTTTTGCG GTAATCTTTT TTGCCGCAGG TATCTATTGG
TGGAACAACC CTCCTAATGC AGCTACCCAC CTTAACGACG ACATGAAAGC TGCTTTCTCT
GTTCACCTTA CTGCTATTGG CTATATTAAT ATAGCACTTG GCTGTATTGC CTTCGTTGCT
TTCCAGCAGC CATCCTTTGC AGATTATTAC AAAGCGCTTG ATTCCTTAGT CTTTTACATC
TACGGTGAAC CTTTTAACCG TGTGAGTTAC GACTATGTTG AGGCTGGTGG TCGCATTGTT
TCTGGCTCAA AAGAGTTTGC TGACTTCCCA GCTTATGCCA TTTTGCCAAA AGATGGTGCT
GCTTTTGGTA TGTCGAGAAC CGTGATTAAC CTCATTGTGT TTAACCATAT CATTTGCGGT
GTACTCTACG TTTTTGCTGG TGTGTATCAT GGTGGTCAGT ACTTGCTTAA GATTCAGCTT
AATGGTTTGT ACAGCCAAAT TAAGTCAGTA TTCATTACCA AAGGACGCGA TCAAGAAGTA
CAGGTTAAGA TTCTTGGTAC GGTGATGGCT CTTTGTTTTG CTACCATGCT TTCAGTGTAT
GCTGTTATTG TATGGAACAC TATTTGTGAG TTGAACCTTT TTGGTACCAA CATCATGATG
TCGTTCTACT GGTTAAAGCC GCTTCCAATG TTCCAGTGGA TGTTTAATGA CCCAAGTATT
AATGACTGGG TTATGGTTCA CGTTATTACG GCTGGTTCGC TCTTTTCTCT TATTGCATTG
GTTCGTATCG CTTTCTTCTC ACATACTTCT CCGTTGTGGG ATGACCTTGG ACTTAAAAAG
AACTCCTATT CATTCCCTTG CTTAGGTCCA GTTTATGGTG GTACTTGCGG TGTTTCGATT
CAAGACCAGC TTTGGTTTGC AATGTTGTGG GGTATTAAAG GTCTTTCAGC CGTTTGCTGG
TACATTGATG GTGCATGGAT TGCATCTATG ATGTATGGTG TACCTGCTGC TGACGCGAAA
GCTTGGGATT CAGTTGCTGG TCTTCAGCAC CACTATACCT CAGGTATTTT CTATTACTTT
TGGACAGAAA CGGTAACGAT TTTCTCAAGT CCTCACCTTT CTACAATTCT GATGATTGGT
CACTTGGTAT GGTTTATCAG TTTTGCTGTG TGGTTTGAAG ATCGTGGTTC ACGTCTTGAA
GGTGCAGATA TTCAAACAAG AACTATTCGT TGGCTTGGTA AAAAGTTCTT GAACAGAGAT
GTTACCTTCC GTTTCCCAGT GTTGACTATT TCTGATTCAA AGATGGCAGG TACCTTCCTC
TATTTTGGAG GCGTATTTAT GCTTGTGTTC CTCTTTATTG GTAATGGATT CTATCAAACA
GATTCCCCAT TACCACCACA AGTTGGTGAT GCAAGTGTAT CGGGTCAGAT GATGTTAACG
CAAGTTGTTG ATTATCTACT CAAGCTTATT GCTTAA
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| Protein sequence | MAEQVNPAGV KPKGTVPPPK GNAPSPKGNG AAGAPSVIKE QDAAKMRRFL FQRTETRSTK
WYQIFDTDRV DDEQVVGAHL ALLGFLGYLM AIYYISGVQV FPWGAPGFQD NWFYLTIKPR
MVSLGIDTYS TKTEDLQWAA SNLLGWALFH IISGSILIFG GWRHWTHNLT NPFTGRAGNF
RDFRFLGKFG DVVFSGTSAK SYKDALGPHT VYMSLLFLGW GFVMWFVLGF APIPDFQTIN
SETFMSFIFA VIFFAAGIYW WNNPPNAATH LNDDMKAAFS VHLTAIGYIN IALGCIAFVA
FQQPSFADYY KALDSLVFYI YGEPFNRVSY DYVEAGGRIV SGSKEFADFP AYAILPKDGA
AFGMSRTVIN LIVFNHIICG VLYVFAGVYH GGQYLLKIQL NGLYSQIKSV FITKGRDQEV
QVKILGTVMA LCFATMLSVY AVIVWNTICE LNLFGTNIMM SFYWLKPLPM FQWMFNDPSI
NDWVMVHVIT AGSLFSLIAL VRIAFFSHTS PLWDDLGLKK NSYSFPCLGP VYGGTCGVSI
QDQLWFAMLW GIKGLSAVCW YIDGAWIASM MYGVPAADAK AWDSVAGLQH HYTSGIFYYF
WTETVTIFSS PHLSTILMIG HLVWFISFAV WFEDRGSRLE GADIQTRTIR WLGKKFLNRD
VTFRFPVLTI SDSKMAGTFL YFGGVFMLVF LFIGNGFYQT DSPLPPQVGD ASVSGQMMLT
QVVDYLLKLI A
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