| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0336 |
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| Symbol | |
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| ID | 3748056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 376974 |
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| End bp | 377948 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637772863 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_378652 |
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| Protein GI | 78188314 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0816826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGA AAAGTAAGCT CATTGTGAGT GCTATCGCGT TGTTCGTGGT AGCGCTTGTG
GCGTGGTTTT TTCTTTTTAA AGGAAATAAG GGAGAGGAGG AGCGATATCG CGACGTGCAA
GTGGTGCGTG GCGCTATAAG TGATGTGGTA GCTACAACGG GAGTGGTGGA GCCAAAAAAT
CGTTTAAAAA TTCAATCATC CATTGCGGGG CGTATTGAGG AGATTGTTGT TAGCGAAGGT
GAAATGGTGC GTAAAGGGCA GGTGCTTGCT TTGTTAAGCT CTACTGAGCG AGCGGCGTTG
CTTGATGCTG CTCGTTTGCA GGGTAAAAGC GAAGAGGCGT ATTGGAAAAA AGTCTATAAA
GAGACGGCAG TGCTTGCGCC GCTTGATGGG CAGGTTATTG TGCGAAGTAT TGAGCCGGGG
CAAATGGTTA ATGGCAGTGA CTCGCTTTTT GTACTCTCCG ACCGCTTAAT GGTAAAAGCC
TTTGTTGATG AAACCGATAT TGGGCGTGTG AAGGTTGGGC AGCAAGCTAC CATCCAGCTT
GATGCCTATC CCGACATTAG CGTGCGTGGT AAAGTAGAGC ATATTGACTT TGAGTCGCGC
TTGCAGAACA ACGTAACCAT GTATTACGTG GATATTATAC CTGAGCAAAT TCCGTCGGTT
TTTCGCTCTG GGATGAGCGC TACTATTACG ATTATCGTGA AACAAAAGCC GAACGCCTTA
TTAGTGCCGC TTGAGGCAGT GCAGCAACGC AATGGGCAAT CGGTGGTGCT TCAGCGCAAT
AATGCCTCAT CCTCATCCGC AAAAGTGCGT TATTGCGCTG TGCAAACGGG TTTGCGCAAT
GAGCAAATGG TTGAAATTGT GGCAGGGCTT GGTGAGCAAG ATGCGGTTTT GTTGCCCGAT
ACAGCGTTTG CGCTTCCTTC TAAAAAAGGG GGGACTAATC CATTTCGTCC GCAACGTTCA
CCTAATCGCC CATGA
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| Protein sequence | MKQKSKLIVS AIALFVVALV AWFFLFKGNK GEEERYRDVQ VVRGAISDVV ATTGVVEPKN
RLKIQSSIAG RIEEIVVSEG EMVRKGQVLA LLSSTERAAL LDAARLQGKS EEAYWKKVYK
ETAVLAPLDG QVIVRSIEPG QMVNGSDSLF VLSDRLMVKA FVDETDIGRV KVGQQATIQL
DAYPDISVRG KVEHIDFESR LQNNVTMYYV DIIPEQIPSV FRSGMSATIT IIVKQKPNAL
LVPLEAVQQR NGQSVVLQRN NASSSSAKVR YCAVQTGLRN EQMVEIVAGL GEQDAVLLPD
TAFALPSKKG GTNPFRPQRS PNRP
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