| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0140 |
|---|
| Symbol | |
|---|
| ID | 3747186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 154291 |
|---|
| End bp | 155871 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637772667 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_378461 |
|---|
| Protein GI | 78188123 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACAA CAGTCAGGCC TGATGAGGTT TCATCCATAC TTCGCAAACA GCTTGCCAAT
TTTGAGTCAG AAGCTGACGT ATATGATGTT GGAACAGTGC TCCAGGTTGG TGACGGTATC
GCCCGTGTGT ATGGGTTGAC AAAAGTCGCA GCCGGTGAGC TTCTTGAATT TCCAAACAAT
GTAATGGGCA TGGCGCTTAA CCTCGAAGAG GATAACGTTG GTGCAGTGTT GTTTGGTGAA
TCCACCATGG TGAAGGAGGG TGATACTGTA AAGCGTTCAG GTATTTTGGC TTCTATTCCG
GTTGGTGAAG CTATGTTAGG TCGCGTTATC AATCCACTTG GTGAGCCAAT TGATGGTAAA
GGGCCTATTG ATGCTAAACT TCGTTTACCA CTTGAGCGTC GTGCTCCTGG TGTTATTTAT
CGTAAATCAG TACATGAGCC ACTGCAAACA GGCTTAAAAG CTATTGATGC TATGATTCCT
GTTGGTCGTG GTCAGCGTGA GTTGATTATT GGTGACCGTC AAACAGGTAA AACCGCTGTA
GCGCTTGATA CCATTATCAA CCAGAAAGGT AAAGGCGTTT TTTGTATTTA CGTTGCTATC
GGTTTAAAAG GTTCAACGAT TGCGCAGGTT GTAAGTACGC TTGAAAAATA TGATGCGCTT
TCTTACACCA CTGTTATTGC TGCTACAGCT TCCGATCCTG CTCCACTTCA GTTTATTGCT
CCATTTGCAG GCGCTACGCT TGGTGAGTAT TTCCGCGATA CTGGTCGCCA TGCGCTTGTT
ATATATGATG ATCTTTCAAA GCAGGCTGTT TCTTATCGTC AGGTTTCGCT CTTGCTTCGT
CGTCCACCAG GACGTGAAGC TTACCCTGGT GATGTGTTCT ACTTACACTC TCGTTTGCTT
GAGCGTGCTG CAAAAATTAC CGATGATGTT GAAGTCGCTA AAAAAATGAA CGACCTTCCT
GATGCCTTAA AGCCATTGGT GAAGGGTGGA GGTAGCTTAA CGGCATTGCC TATTATTGAA
ACACAGGCAG GTGACGTGTC GGCATACATT CCAACAAACG TTATTTCTAT TACTGACGGT
CAAATCTTCC TTGAGTCAAA CCTCTTTAAC TCAGGTCAGC GTCCTGCTAT TAACGTTGGT
ATTTCGGTAT CGCGTGTAGG TGGTGCAGCG CAAATTAAAG CAATGAAGAA AATTGCTGGT
ACGCTTCGCC TTGATTTGGC TCAGTTCCGC GAACTTGAAG CCTTCTCTAA ATTTGGTTCT
GACCTTGATA AAACAACCAA AGCGCAGCTT GATCGTGGCG CTCGCCTTGT TGAAATTTTA
AAGCAAGGGC AGTATGTGCC AATGCCCGTT GAAAAACAGG TGGCAATTAT TTTTGTAGGT
ACGCAAGGAT TGCTTGATTC CGTTGACTTG AAATTTATCC GCAAGTGTGA GGAAGAGTTC
CTTGCAATGC TTGAAATGAA GCATGCAGAT ATTCTTAGTG GAATTGCCGA GAAAGGGACG
CTTGAAGCTG ATGTAGCAAG CAAGTTGAAA GATATTGCAA CCAAGTTTAT TGCTACATTT
AAAGAGAAAA ACAAAGCCTA A
|
|---|
| Protein sequence | MSTTVRPDEV SSILRKQLAN FESEADVYDV GTVLQVGDGI ARVYGLTKVA AGELLEFPNN
VMGMALNLEE DNVGAVLFGE STMVKEGDTV KRSGILASIP VGEAMLGRVI NPLGEPIDGK
GPIDAKLRLP LERRAPGVIY RKSVHEPLQT GLKAIDAMIP VGRGQRELII GDRQTGKTAV
ALDTIINQKG KGVFCIYVAI GLKGSTIAQV VSTLEKYDAL SYTTVIAATA SDPAPLQFIA
PFAGATLGEY FRDTGRHALV IYDDLSKQAV SYRQVSLLLR RPPGREAYPG DVFYLHSRLL
ERAAKITDDV EVAKKMNDLP DALKPLVKGG GSLTALPIIE TQAGDVSAYI PTNVISITDG
QIFLESNLFN SGQRPAINVG ISVSRVGGAA QIKAMKKIAG TLRLDLAQFR ELEAFSKFGS
DLDKTTKAQL DRGARLVEIL KQGQYVPMPV EKQVAIIFVG TQGLLDSVDL KFIRKCEEEF
LAMLEMKHAD ILSGIAEKGT LEADVASKLK DIATKFIATF KEKNKA
|
|---|
| |