| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0107 |
|---|
| Symbol | |
|---|
| ID | 3747595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 121673 |
|---|
| End bp | 122776 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637772633 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_378428 |
|---|
| Protein GI | 78188090 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCAA CACGCGCAAA ACTGCTTTTA GAAAATGGCT CACTGTATAG CGGTACGCTT
TTTGGGCACA TTGGCGAAGC TATCGGTGAA GTAGTTTTTA ACACCTCTCT TACGGGCTAT
CAGGAAATCC TTACCGATCC CTCTTATGCG GGTCAAATGG TTACCATGAC CTATCCGTTG
ATTGGCAACT ATGGCATTAC CCCCAACGAT AACGAATCAC AGAGCATTTG GGCATCAGCC
TTAATTGTGC ATGAGGTTTC GCGCATTCAT AGCAATTACG AGGCATCTGG CTCGCTTGCT
GCCCGCTTAC GTGAAGCACA AGTTACCGGC TTAGCGGGCA TTGATACTCG CCGCCTTGTG
CGCGAATTGC GAGAGCATGG TGCCATGCGA GCCATTATTG CACCTGCTGA AGTTTCGGAC
GATGAGTTAC GCCAAAAAGT TGCGGCTGCT CCCAATATGA GCGGACGCGA TTTAGTATCA
ACCGTTACCA CGCAAAAAAG CTATTCGTTA GAGACTGAAG GCGCTCAATA TCACGTTGTG
GCTTTTGATT ATGGTATGAA AACCAACATT TTGCGCTTAC TGCAAAATGC GGGCTGCCGT
GTTACCGTGC TGCCCGCTCA AGCCACCATG AACGATGTGC TTGCTCTTAA CCCTGATGGA
GTCTTCCTCT CCAACGGTCC AGGCGATCCC GCCGCAGTTG GCTATGCAAT TGAAACCATT
CGTGCCCTTG TTGAATATAA CCGCACCACC AAGCCGCTGC CAATGTTTGG CATCTGCCTT
GGGCACCAAT TGCTCTCCCT TGCTTGTGGC GGCACAACCT ACAAGTTGAA GTTTGGACAC
CACGGTGGCA ACCACCCCGT GCGCAATCTT GCTACAGGGC AAATTGAAAT TACGTCGCAA
AATCACGGTT TTGCGGTAGC AATGGAGGCG CTGCCTGAAG AACTTACCAT GACGCACCTC
AATTTGTACG ACCACACCGT TGAAGGGGTG CGCCATAAAA ACCTCCCCTG CTTTTCGGTG
CAATACCACC CCGAAGCGGC TCCCGGTCCA CACGATTCGC ACTACCTTTT TGATGAATTC
ACCTCGCTTA TGGCAAGGTC TTAA
|
|---|
| Protein sequence | MQPTRAKLLL ENGSLYSGTL FGHIGEAIGE VVFNTSLTGY QEILTDPSYA GQMVTMTYPL
IGNYGITPND NESQSIWASA LIVHEVSRIH SNYEASGSLA ARLREAQVTG LAGIDTRRLV
RELREHGAMR AIIAPAEVSD DELRQKVAAA PNMSGRDLVS TVTTQKSYSL ETEGAQYHVV
AFDYGMKTNI LRLLQNAGCR VTVLPAQATM NDVLALNPDG VFLSNGPGDP AAVGYAIETI
RALVEYNRTT KPLPMFGICL GHQLLSLACG GTTYKLKFGH HGGNHPVRNL ATGQIEITSQ
NHGFAVAMEA LPEELTMTHL NLYDHTVEGV RHKNLPCFSV QYHPEAAPGP HDSHYLFDEF
TSLMARS
|
|---|
| |