| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0099 |
|---|
| Symbol | |
|---|
| ID | 3747587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 112665 |
|---|
| End bp | 113891 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637772625 |
|---|
| Product | sulfide dehydrogenase, flavoprotein subunit, putative |
|---|
| Protein accession | YP_378420 |
|---|
| Protein GI | 78188082 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAA AAATTGTGGT GCTTGGAGCG GGAACAGGGG GAACCATTAT TTCAAACAAT
TTGCGGCGCC ATTTGCCTCA TGATTGGGAG ATTACGGTAA TTGATCGTGA TGACCATCAC
ATCTATCAAC CCGGATTGCT TTTTGTGCCC TTTGGGCTCC AAAAGGTGAG TACGTTAGTG
CGTTCACGTA AAAAATATAT TCTGTCGGGC ATTAACTTTG TGATTGATGA AATTACTCGT
ATTGAGCCCG ATAAACGAGT TGTTACAACA AAGAAGCATT CCTTTCCTTA CGACTTTTTA
GTGATTAGTA CGGGGTGCCG TGTGGTTCCT GAAGATAATG ATGGCTTAAT GGAGGCGTGG
GGTAAAAATG CCTTCTCTTT TTACACTATT GCATCGGCTG AGTTGTTGCA TCGGAGGTTA
CAGGAGTTTC AAGGCGGGAA GTTGGTGCTT AATATTGCAG AAGTTCCCTT TAAGTGCCCC
GTTGCGCCAA TTGAATTTGT CTTTTTAATG GATTGGATGT GCCGCAAAAA AGGCATTCGC
AATAAAACAG AAATTGAGTT AGTAACCCCG TTAACGGGTG CATTTACTAA ACCAAAAGCT
TCGGCAGTGT TTAATGAATC GGCTAAAGCA AAAAATATTA AAATTACTCC CGGTTTTTCG
CTTAATGAGG TGCATGGAAA GGAGGGGTAT ATTCAATCGG TGCAGGGCGA TAAGGTGAAC
TTTGATACGT TAGTGATTAT TCCTTCAACA CAAGGTGATG AGGTGATATC GTCATCAGGT
TTGGATGATG GTATTGGTTT TGTGCCAACG CATCACCACA CGCTTCAAGC GTTAAAGCAT
GAGCGTATTT ATGTGGTTGG CGATGCCACA AACGTTCCCA CCTCTAAAGC TGGTTCAGTT
GCCCACTATG AAGCCGATGT TGTTGCTTTT AACATTATGG CTGAAATTCA TGGCATTAAA
CCTGAAGAAA TTTATGATGG GCACTCTACC TGTTTTATTG TTTACTCCAA AGGCACCTCA
TCGCTTATTG ACTTTAACTA CAAAATTGAG CCGTTACCGG GTCAATTTCC TATGCCAAAG
TTTGGTCCAT TTTCTCTCTT AAAAGAGACT AAAATGAATT GGTATGGTAA ACTTGGGTTT
GAGTGGCTTT ATTGGAATGT GCTACTTGCG GGTCATAACC TTGGTGCGCC ACCAACGTTA
GTGATGGCTG GTAAGGAGCT TGGTTGA
|
|---|
| Protein sequence | MSKKIVVLGA GTGGTIISNN LRRHLPHDWE ITVIDRDDHH IYQPGLLFVP FGLQKVSTLV
RSRKKYILSG INFVIDEITR IEPDKRVVTT KKHSFPYDFL VISTGCRVVP EDNDGLMEAW
GKNAFSFYTI ASAELLHRRL QEFQGGKLVL NIAEVPFKCP VAPIEFVFLM DWMCRKKGIR
NKTEIELVTP LTGAFTKPKA SAVFNESAKA KNIKITPGFS LNEVHGKEGY IQSVQGDKVN
FDTLVIIPST QGDEVISSSG LDDGIGFVPT HHHTLQALKH ERIYVVGDAT NVPTSKAGSV
AHYEADVVAF NIMAEIHGIK PEEIYDGHST CFIVYSKGTS SLIDFNYKIE PLPGQFPMPK
FGPFSLLKET KMNWYGKLGF EWLYWNVLLA GHNLGAPPTL VMAGKELG
|
|---|
| |