Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0093 |
Symbol | |
ID | 3746427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 108712 |
End bp | 109719 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637772619 |
Product | heptosyltransferase |
Protein accession | YP_378414 |
Protein GI | 78188076 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.283951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTGC CTATCCAATC AATTCTTATT ATTCGCTTAA GCTCTATTGG CGATATTGTT CTTACAACTC CACTGATTCG TTTGCTTGCG GCGGCGTATC CTCATGCTAC GCTTGATTAT TGCACCAAGT TACCATTCAT TCCTCTTCTC GCTCATAATC CTCGTCTTTC GCATCTCTTT ACACCCGAAT TGTTGCCAAC AACAGCCTAT GACTTAGTGG TTGATTTGCA AAACAATCGT CGTTCTCAAT TATTGGTGAA TTCATTGAAG TCGCGCTACC ATGTTGCTTA TCATAAAGAA AATTGGAAAA AGTGGCTCTA TGTCCATCTA AAGCTCAATT TGTATGGCAA CTCGTGGCTG CATGTTGTGG ATCGTTATCG TCAAGCGATG GATTCATTTC AGCCGTTAGC CGATGATTCA GCTGGGTGTG AGCTCTATCC CGCCTCAGAA GAGCTTGAAT TTGCAGCTTC CGTTACCGCT CATGCAGGTA AAGTGTTAGC AATTTGTTGC GGCGCAAATC ACTTTACAAA ACGTTATCCC GCCTTGCATT TTGCTACGGT GGTGCGCTTG TTGATGGAGC GTCATCCATC ATTAACGGTG TTGCTGCTTG GTGGTAAGGA GGATGTGCCG CAAGTGAATG CTATTCTTGA GGCTGTGCCA TCAGCGTTGC GCTCGCAAAT GGTAGCGTTT GCGGGTGAGT GTTCGCTTAT GCAAAGTGCG GCATTGCTGG CTCGCAGTGA TGCGGTGCTT TGTAACGATA CTGGGTTAAT GCACATAGCA TCGGCATTTG GCAAGCAGCT TTTTGTGCTC TTTGGTTCAT CGGTGCGTGA ATTTGGTTTT TTGCCTTATC ACACGCCGTA TGAATTATTT GAAGTGAGTA AGCTGCGCTG TCGCCCTTGT TCACATATTG GGCGCAGTCG TTGCAAAAAA AAGCATTTTC GCTGCATGCA TGCTCTTTCT CCCGAATCTA TAGCACAACG GATTCATCTC TATTTTGAAA AACGTTGA
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Protein sequence | MQLPIQSILI IRLSSIGDIV LTTPLIRLLA AAYPHATLDY CTKLPFIPLL AHNPRLSHLF TPELLPTTAY DLVVDLQNNR RSQLLVNSLK SRYHVAYHKE NWKKWLYVHL KLNLYGNSWL HVVDRYRQAM DSFQPLADDS AGCELYPASE ELEFAASVTA HAGKVLAICC GANHFTKRYP ALHFATVVRL LMERHPSLTV LLLGGKEDVP QVNAILEAVP SALRSQMVAF AGECSLMQSA ALLARSDAVL CNDTGLMHIA SAFGKQLFVL FGSSVREFGF LPYHTPYELF EVSKLRCRPC SHIGRSRCKK KHFRCMHALS PESIAQRIHL YFEKR
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