| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0072 |
|---|
| Symbol | |
|---|
| ID | 3746406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 79762 |
|---|
| End bp | 80826 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637772598 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_378394 |
|---|
| Protein GI | 78188056 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAG CACGAATTTT AAGCGGCATG CGACCTACCG GCAAGCTCCA TCTTGGACAC
TACACCGGTG CCCTTGAAAA TTGGGTTGCC CAACAAAATC AATGCTCTGC GGATGGCAAC
CGCGCTTACG ACACCTATTT TCTGATTGCC GATTACCATA CCTTAACCAC CTCGCTTTCA
ACCGATGACG TGTATGCTCA TTCGCTTGAT ATGCTGGTGG ATTGGCTTGC CGCTGGCATT
GATCCCGAAA AAAGTCCTAT GTTTCGCCAA TCGCAGGTAA AGCAACATGC CGAGCTTTTT
TTGCTTTTCT CTATGCTTAT TACCTCCGCA CGCTTGGAGC GCAATCCAAC GTTAAAAGAG
CAAGTGCGCG ACCTTCATAT GGATTCAATG AGCTACGGGC ATCTTGGCTA TCCTGTTTTG
CAATCAGCAG ATATTTTGCT CTACAAGGCA AACGTGGTGC CTGTTGGTGA GGATCAAATT
CCCCATGTGG AAATTACCCG CGAAATTGCT CGCAAGTTTA ACAACCACTT TCCTCATCCG
CTTTACGGCA ACGTCTTTGC TGAACCTGAA CCAAAAATCA CCAAATTTGC ACGCCTTGCA
GGGCTTGACG GAAAAGCAAA AATGTCGAAA TCACTCGGCA ACACCATTTT CCTCTCCGAT
CCACCCGACG AAGTGCTCCG CAAAATGCGC ACGGCGGTTA CCGATACCCA AAAAGTGCGC
AAAAACGATG CAGGACGCCC CGAAGTGTGC ACCGTTTTTA GTTACCACAA ACGCTTTTCC
ACGCCTGAGC AGTGCGAAGA AATTGCGGCT GGCTGCCAAA GCGGAGCGCT TGGTTGCGTT
GATTGTAAAA AGCAGTGTGC CGCAAACATT TCTGCTGAAC TTGCACCGCT CTTAGAACGC
CGCACATACT ACGAAGCTCG CATGGATGAG GTGAAAAATA TTTTATTTGA GGGAGAAGCA
AAAGCGCGCA CCGTTGCCGA ACAGACCATG CAAGAGGTAC GCACCGCAAT GAAGCTTGGT
GAAGCAAATT GCAGCGCCAC TTTTTTCAAC ACTTCATGTT CATAG
|
|---|
| Protein sequence | MATARILSGM RPTGKLHLGH YTGALENWVA QQNQCSADGN RAYDTYFLIA DYHTLTTSLS
TDDVYAHSLD MLVDWLAAGI DPEKSPMFRQ SQVKQHAELF LLFSMLITSA RLERNPTLKE
QVRDLHMDSM SYGHLGYPVL QSADILLYKA NVVPVGEDQI PHVEITREIA RKFNNHFPHP
LYGNVFAEPE PKITKFARLA GLDGKAKMSK SLGNTIFLSD PPDEVLRKMR TAVTDTQKVR
KNDAGRPEVC TVFSYHKRFS TPEQCEEIAA GCQSGALGCV DCKKQCAANI SAELAPLLER
RTYYEARMDE VKNILFEGEA KARTVAEQTM QEVRTAMKLG EANCSATFFN TSCS
|
|---|
| |