Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0020 |
Symbol | |
ID | 3747890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 19790 |
End bp | 21253 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637772544 |
Product | hypothetical protein |
Protein accession | YP_378342 |
Protein GI | 78188004 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGCC CGATGAGTGC CCCAAATAGT GCCCTAATGA GCTCCAAAAT TAGTTCCCCC ATCAGTCCAA CAACTCTCCA TCATCTGCTT GATATTCCGC TTACTACGCC GCTTACGCTG GAGGCAATGT GCCGCAATCT TCGTCCAATT TACTATCCTG CGCCGCACCT ATCGCCACGC TTAGAGCGCT TTAGCTTGGC GCTGGTAGAG GCAATGCAAG GCTTGGGCAT TCAGGTGCAT TCGCCAGAGG AGTTGGCACT ACACGATGGG CGTTTTCCTG CTGGCACGGT GATTGTTGCG CCGGGTATTT TTGATGATGA TGCGCTGCCG ATTAACCGCG TCAGTACGCT TTACAACAAC ATTATTGTTG GCATTTACGA TGAAGCTGCA CCCGTATCGA ACAGCTCATT GCCGCAAGAG CGGCTTGATG CGATTGTGGG GCGTTTAGCT CGCGATATGG TGCATATTTT AATTTTTGTA ACCGATGAGT CGTGGACAAT TTGCACCATG AATGGCGGCA TTGCAACCTT TGCTACGCCA CTGCCACACG TTGCGGATGT GCGCTCTACG TTGGTTCCAA AACTAACGGC GCAAGTAGTT CCACCCAGAA ATGAGGCGTT TACTTTTGTT GATGGAGCGT TGGATATTGC CTCACCAACG TTTAGCGCAA TTGCAGAGGA TTTTGTGCAG TGCAGTGCCT TGTGGAGCCA AAGCAGTGCG CTCCTTACGC ACACTTCAAC CGAAGGGTTA CACTACCGCA ATTCATTTTA TAAACGTATT GTTGCTCGCT ACCTTGATGA GCGCAGTGGT ATGAGCTATG GCTTTTTTGC ACGCCAATTG CCTATTCCTA CGCTTCAACC CGCTCAAAAA AAGAAGGCTG ATGGATTGAT GGAAGTACAG CTTGCAGGTG AGCAATGGTT TGTAGCAATT CCAGAGGTAA GCATTATTAC CACGCGCTCG GGATGCCGCA AGCATTGCTT AAATCCGCTG GAAGATTTAG TAGCTCTTGG CTTAAAAGAG GAGCAGGGGA AGCGAGTTGC CTCCATTACC ACACCGTCAA CTTCGTGCAA CACCGTTATT AAGCCCTCGT TTGATACGTT GGCAATTCTT GCCCATGCGT TGGGCAATGC TATTGTGGGG AGCATTTTGT TGGTACTTCA GCCCAATGCG CCTTTTTCCC GCCATCTTGC ACGTAACGGT GCTACCATTA CCCATTGGCA CGGTTATCCG CAAAAGAGCG ATCTTCCCGA TGGCTATTGG TTGCATGGTG CCGAAAATCC GCCCGTAGCC TGCTCAACCC CGCAATCTGC CGCTTACAGT TTACTTGGCA AACTTAGTGC TCTTGAGCAA GCGCTCACGC AACAGGGCAT CTATCACGGC GATGTTCACA CCGAACCGCA TCACGGCACC AACATTGTCG GCATTCTTTC CCTTACCGAG GTTGCTCGCC ATTTTGCAAG ATAG
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Protein sequence | MERPMSAPNS ALMSSKISSP ISPTTLHHLL DIPLTTPLTL EAMCRNLRPI YYPAPHLSPR LERFSLALVE AMQGLGIQVH SPEELALHDG RFPAGTVIVA PGIFDDDALP INRVSTLYNN IIVGIYDEAA PVSNSSLPQE RLDAIVGRLA RDMVHILIFV TDESWTICTM NGGIATFATP LPHVADVRST LVPKLTAQVV PPRNEAFTFV DGALDIASPT FSAIAEDFVQ CSALWSQSSA LLTHTSTEGL HYRNSFYKRI VARYLDERSG MSYGFFARQL PIPTLQPAQK KKADGLMEVQ LAGEQWFVAI PEVSIITTRS GCRKHCLNPL EDLVALGLKE EQGKRVASIT TPSTSCNTVI KPSFDTLAIL AHALGNAIVG SILLVLQPNA PFSRHLARNG ATITHWHGYP QKSDLPDGYW LHGAENPPVA CSTPQSAAYS LLGKLSALEQ ALTQQGIYHG DVHTEPHHGT NIVGILSLTE VARHFAR
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