Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0007 |
Symbol | |
ID | 3747877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 8311 |
End bp | 10410 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637772531 |
Product | peptidase M41, FtsH |
Protein accession | YP_378329 |
Protein GI | 78187991 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGCGTC CGAAAATTCC CTTTTTCTAT TCACTTATTG CGCTTGCGCT CATTATAGGC GTACAACTTG CTTTTTTCTG GTCAGGTTCA ACGCCCGAAG TGCCATATAG CACATTCCGC TCTCTTATTG CTGAAAATAA GGTAGAATCG GTAAAACTTG CGCCTGAAAA AATTATGGTG CAATTAAAGC AAGGTGTAAC GGTAAGTGTT GGGGCAGCAG AGGGTGATCA GCCATCAGTT TCAGCACCAA AATCGTCATC GAAACCATCA AATGAGTTGG TGGTAACGCC CGTGCGCGAC GACAAGCTTA TTGAGCTGCT TGAAAGCAAA GGCGTGCGCT ACCAAGGTGT GCAAGGTAAT TCATGGATTG GTGAATTGCT TCAATGGATT ATTCCCTTTG GCTTGCTGCT TGGTATGTAC TTTTTTGTGT TCCGTCGTAT GGGTGGACCA GGCTCTCAGT TTATGAACAT TGGGAAGAAT AAGGCTGCCC TTTACGAAAA TTTTGATGAA CACACGCGCA TTACCTTTAA AGATGTTGCT GGGCTGGATG AGGCAAAAGC GGAGGTGATG GAGGTTGTTG ATTTTCTGAA AGATCCTAAA AAATATACAA CGCTTGGCGG TAAGCTGCCT AAAGGTGTCT TGCTGGTTGG ACCTCCTGGT ACTGGTAAAA CCTTGCTTGC TAAGGCGGTT GCGGGCGAAG CTGATGTGCC CTTTTTTAGC TTGAGCGGTT CCGATTTTGT GGAGATGTTT GTTGGCGTTG GTGCAGCTCG TGTGCGCGAT CTTTTTAAGC AAGCGAAGGA GAAAGCTCCA TGTATCATCT TTATTGATGA AATTGATGCC GTAGGTCGTA GCCGTGGCAA AGGTGTTATG ATGGGCGCTA ATGATGAGCG CGAAAACACG CTGAATCAGT TGCTTGTTGA AATGGATGGC TTTGCAACCG ACAAGGGCGT TATTCTGATT GCAGCAACCA ATCGCCCCGA TGTGCTTGAT TCGGCGCTTT TGCGTCCAGG GCGTTTTGAT CGCCAAATTA TGGTGGATAA GCCCGACTTA AAAGGGCGTG TTGATATTTT GAAAGTGCAC ACCAAATCGC TTTCGCTTGG TAACGACGTC AATTTAAAAA CACTTGCCTC GCAAACGCCG GGCTTTGCTG GCGCCGAAAT TGCCAATGCT GCTAACGAAG CTGCACTCTT AGCCTCGCGC CGCAACAAGC AAACCATTGA TATGAAGGAT TTTGAAGATG CTATTGAGCG CGTGGTTGCT GGGCTTGAAA AAAAGAATAA GGTGATTAAT CCCCGTGAGC GCCAAATTGT AGCCTATCAC GAAGCGGGGC ACGCTATTGT AAGCTGGATG ATGGTGGAAA ATGATCCTGT GCAAAAAATT TCCATTGTGC CGCGTGGCAT GAGTGCGCTG GGTTACACCA TGAATATTCC GCTTGAAGAT CGCTACTTAA TGACGCGTCG TGAGCTGTTT GCCCGCATTT GCGGATTGCT TGGTGGGCGC ATTGCGGAGC AGGTGATTTT TGGTGAAATT TCAACAGGTG CGCAAAATGA CCTTGAAAAG GTAACCAGCA TTGCCTACAA CATGGTGATG GTTTATGGCA TGAGCGAGAA GTTAGGCAAC ATCTCTTTTT ATGATAGCCA CAATAGCGGC TACGGCATGG AGAAAAAATA TGGAGAAGAA ACGGCGCGCT TAATTGACCA AGAGGTTCGC CACATTATTG AAGAGGCGCG TGTTGCTGTA TTGGAATTAC TTGCCGAACA TCGCGATAAG TTAGAGCGCC TTGCAAGTGA ATTGCTTCAA AAAGAGATGC TTCAGCAATC ACAAATTGAA GAGATTCTTG GCAAGCGTCC GGGAGGTAAT CTTTTTCCCT CATCGTATGA TGATGTGGAA GAGGTTGAGG TGGACGCTGC CCCATCGGTT ACCTGCGAAG CGGCAGTGGT GGAGAATGGA ACAGCCGTTA GTGCTACCAC GGATAAAGCA AAGTCGCAAT TAAGCCCATG TGAGCAAAAG GCATTGGAAG AAGCGGTGGC ACGCATTCAG CGGGCACGCG AGCAGCGTGA AGCTCAGCAA CAGCAACAAA ATCCACCAAG CGAGGTGTAA
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Protein sequence | MPRPKIPFFY SLIALALIIG VQLAFFWSGS TPEVPYSTFR SLIAENKVES VKLAPEKIMV QLKQGVTVSV GAAEGDQPSV SAPKSSSKPS NELVVTPVRD DKLIELLESK GVRYQGVQGN SWIGELLQWI IPFGLLLGMY FFVFRRMGGP GSQFMNIGKN KAALYENFDE HTRITFKDVA GLDEAKAEVM EVVDFLKDPK KYTTLGGKLP KGVLLVGPPG TGKTLLAKAV AGEADVPFFS LSGSDFVEMF VGVGAARVRD LFKQAKEKAP CIIFIDEIDA VGRSRGKGVM MGANDERENT LNQLLVEMDG FATDKGVILI AATNRPDVLD SALLRPGRFD RQIMVDKPDL KGRVDILKVH TKSLSLGNDV NLKTLASQTP GFAGAEIANA ANEAALLASR RNKQTIDMKD FEDAIERVVA GLEKKNKVIN PRERQIVAYH EAGHAIVSWM MVENDPVQKI SIVPRGMSAL GYTMNIPLED RYLMTRRELF ARICGLLGGR IAEQVIFGEI STGAQNDLEK VTSIAYNMVM VYGMSEKLGN ISFYDSHNSG YGMEKKYGEE TARLIDQEVR HIIEEARVAV LELLAEHRDK LERLASELLQ KEMLQQSQIE EILGKRPGGN LFPSSYDDVE EVEVDAAPSV TCEAAVVENG TAVSATTDKA KSQLSPCEQK ALEEAVARIQ RAREQREAQQ QQQNPPSEV
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