Gene Caci_9044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_9044 
Symbol 
ID8340439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10455755 
End bp10456900 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content73% 
IMG OID644962136 
Productcell wall hydrolase/autolysin 
Protein accessionYP_003119698 
Protein GI256398134 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.683287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACTG AACCGACGTA CCGCCGCGGC GACTCCGGGC CCGCGGTGGC CGCGATCCGC 
GAACGCCTGG CCCGGCTCGG CCTGATCGAC GCCGGGTCCA TCCCCGCACA GGGCGAGCCG
GTCTTCGACG ACGCGGTGGA GAACGCGGTC CGCCACTTCC AGCAGACCCG CCGCACGACG
GTCGACGGCA TGGTCACCCC GGGCACGATG CGCCTGCTGG AAGAGGCCTC CTGGCGCCTC
GGCGACCGCG ACCTGGTCCC CTCTCCCGCC GAGCCGCCGT TCGGCGACGA CGTGGCCGAA
CTGCAGCGCT CGCTGCTCAC CCTCGGCTTC GACTGCGGCC GGGTCAACGG CGCCTATGAC
CCCACCACCG TGGGGGCGGT CCGGGAGTTC CAGCGCAACG TCGGACTCCC GGCGACCGGC
GTCACCGACC TGGCGACCGT CCAGGCCCTC AACCGTCTGA ACCGCCGGAT GGCGCACGGC
GGCCTGCTGC ACGCGATGCG CGAATCAGAG GCCATCCAGA GCGCGGGCCC GGCCCTGCCC
GGCAAGACCC TGGTCCTGGA TCCCGGCCAC GGCGGTGCGG ACACCGGCGT CCGCGGCGGC
GGCCTGATCG AGGCCGAAGT CGTCTTCGAC ATCGCCGATC GGGTGAAGAC GCGGCTGGAG
AAATTGAGCG TCACCACGCA CATGTCGCAC GGTCCCGGCG GCAGCCCCGA CGACCGCCGC
CGTGCGGAGA AGGCCAACGA ACTCGGCGCG GATCTCCTCA TCTCGCTGCA CTGCGACTTC
CACAGCAACC CCGCGGCCTC CGGCGTCGCG GCGTTCTACT ACGGCAACGA CCGCTTCGGC
CACAGCTCCC CCACCGGCGA GCGCTTCGCC GGCCTGGTGC AGCGCGAGGT CACCGCGCGC
ACCGGCCTGG CCAACCTCGG CACCCACGGC ATGACCTGGG ACGTGCTCCG CTACACGCAG
ATGCCGGCGG TTCGCATCGA ACTCGGCTAC CTCACCAGCC CGCACGACGC CGCGCTGCTC
GCCTCGCAGC GGTTCCGCGA GTCGTGCGCC GACGCCATAG TGGTCGCGGT CCAGCGGCTG
TACCTGCCGC CGGAGTCGGA CGCGCCGACC GGTGTGCTGC GGCTGGCGGA GCTGCGCTCG
CACTGA
 
Protein sequence
MTTEPTYRRG DSGPAVAAIR ERLARLGLID AGSIPAQGEP VFDDAVENAV RHFQQTRRTT 
VDGMVTPGTM RLLEEASWRL GDRDLVPSPA EPPFGDDVAE LQRSLLTLGF DCGRVNGAYD
PTTVGAVREF QRNVGLPATG VTDLATVQAL NRLNRRMAHG GLLHAMRESE AIQSAGPALP
GKTLVLDPGH GGADTGVRGG GLIEAEVVFD IADRVKTRLE KLSVTTHMSH GPGGSPDDRR
RAEKANELGA DLLISLHCDF HSNPAASGVA AFYYGNDRFG HSSPTGERFA GLVQREVTAR
TGLANLGTHG MTWDVLRYTQ MPAVRIELGY LTSPHDAALL ASQRFRESCA DAIVVAVQRL
YLPPESDAPT GVLRLAELRS H