Gene Caci_8989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8989 
Symbol 
ID8340382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10403990 
End bp10404646 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content73% 
IMG OID644962079 
Producthypothetical protein 
Protein accessionYP_003119643 
Protein GI256398079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.370697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAGT GTCTGAGCCT GCTGGTCCCC GGCGGCGTCC TGGAGCGGGG CACGATCGTC 
GCCCTGCCAC CCCGACCGGG ATCCTCTCCG CAGCTCGGCA CTGGTCCGGG CTACCTCGCG
CTCGGCCTGC TCGCCGGCGC CACAGCTGGA GGTGCTTGGG CCGCAGCGGT GGGCTTCCCG
GACTTGGGCA TCGCTGCGGC TGCCGGGCTG GGGGCGGACC TGTCGCGATT TCTGCTTCTG
GACGAGCCGG GCGACCGCTG GCCCGAGGCA GTCGCACTGC TCGCGAAGGC TGTCGACATC
GTCCTGCTGC GACTGCCGCA TCGGCCGACA GGCCAGCAGG TCCGCGTGCT CACGAGCAAG
GTCCGGACCA CCGAGCGGCA GCGTGGCGCG GTGCTGGTCG TCGCAGGAGA CTGGCCCGAG
GCCCACCTGC GCATGCGCAC GGACCGACAG CAGTGGTTCG GACTCGGCGA GGGCACCGGA
CACCTCACCG GGCGACGCGC GGCGATCGTC AGCGACGGCC GCGCCACCCG CGGGCGCAAC
CGGACGGCCG ACCTCTGGCT ACCTGGCGCG GACGGCTCGA TGTCCGCCTA CTCCGAGGCC
AGCGGCGCCC AATGGAATCC CCACGCGGGC ACTCGACCGC GTCTGCGGAT CGCCTGA
 
Protein sequence
MHECLSLLVP GGVLERGTIV ALPPRPGSSP QLGTGPGYLA LGLLAGATAG GAWAAAVGFP 
DLGIAAAAGL GADLSRFLLL DEPGDRWPEA VALLAKAVDI VLLRLPHRPT GQQVRVLTSK
VRTTERQRGA VLVVAGDWPE AHLRMRTDRQ QWFGLGEGTG HLTGRRAAIV SDGRATRGRN
RTADLWLPGA DGSMSAYSEA SGAQWNPHAG TRPRLRIA