Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8916 |
Symbol | |
ID | 8340309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10327940 |
End bp | 10328452 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644962006 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003119570 |
Protein GI | 256398006 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0707335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.329972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACAGG AACAGGACTT CGACGAGTTC TACCTGGGGT CGGTCCGGAG GGTGACGGCG CAACTCGTCG CGATGCTGGG CGACCCGGTG GAGGCCGAGG ACGCGGTGCA GGAGGCGTAC GCCCGGGCCT GGCAACGCTG GGATTCGGTG TCGCGGATGG ACGATCCCGT CGCCTGGGTG CGGCTGGTGG CCTATCGAAT CAAAGTGTCG TCGTGGCGGT CCGCCGTGCG GCGCACCGTC GCACACAGAC GGCACGGACC GCCACCGGAC GTGCCGGACC TGAGCCCGGA CTCGGTGGCC CTGGTCACCG CCCTGCGGGG CATCCCCGAG GCACAGCGCC GAGCGATCGT CCTCTACCAC CTGGCCGGGC TGACCGTCGA GCAGGTCGCA GCCGAGGTCG GAGCACCGGT CGGCACGGTC AAAGCCCGGC TGTCGCGAGG CCGAGCAGCG CTGGCGCAAG TACTGAGCGA ATCGAAAGAC GGAGACCTGA AGGGGAGGCC CAGCTATGCC TGA
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Protein sequence | MSQEQDFDEF YLGSVRRVTA QLVAMLGDPV EAEDAVQEAY ARAWQRWDSV SRMDDPVAWV RLVAYRIKVS SWRSAVRRTV AHRRHGPPPD VPDLSPDSVA LVTALRGIPE AQRRAIVLYH LAGLTVEQVA AEVGAPVGTV KARLSRGRAA LAQVLSESKD GDLKGRPSYA
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