Gene Caci_8861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8861 
Symbol 
ID8340254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10274277 
End bp10274996 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content72% 
IMG OID644961951 
ProductNUDIX hydrolase 
Protein accessionYP_003119515 
Protein GI256397951 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTTG CCCATGACAT GGACATTCCG ATAGCCGATC CGCTGCCCGA CTGGTTGCTC 
CCGCTGGCTC GCGCCGCGGA GAGCGCGACA GGGCTGGGAC CCCGGTTCAA GCGGCCCGCG
GACCTGGACG GCGAGCCTCG GCGCTCCGCC GTGCTCATCC TGTTCGGCGA GGATCCCGCG
CACGGGCCCG ACGTGTTGTT CGTCGAGCGT GCCAAGACCC TGCGGCACCA TCCCGGGCAG
CCGGCTTTTC CCGGCGGCGC CGTGGATCCC GGCGAGGGTC CGGTGGCCAC CGCGCTGCGG
GAGGCGAACG AGGAGACCGA CCTGGATCCG GCCGGGGTGC AGGTTTTCGG GATCCTGCCC
GATCAGTACG TCTTCCCCTC GGACTTCCTG GTGACGCCGG TGCTGGGCTG GTGGCGCTCG
CCGAGTCCGG TGCGGGTGCG CGATGTGCGG GAGGTCGCCT CGGTGCACCG GATCGCGGTC
AGCGAGCTGG TCGATCCGGC GAACCGGCTG CGGGTCGGCA GTCCTTCGGG GACCTCGAGT
CCGGCCTTCG AGGCCGGACC GTTGTTGATC TGGGGGTTCA CCGCCGCGCT GCTGGACGGG
GTGCTGAAGG CCGGCGGCTG GGAGCTGCCG TGGGACACCG AGCGGGTCGA GCCGCTGCCG
CAGGAGGTGG TGGCGCTGGC GGTGCGCAGC CGCGCGGCGC CGGGGGGAGA AGATAAGTAG
 
Protein sequence
MSVAHDMDIP IADPLPDWLL PLARAAESAT GLGPRFKRPA DLDGEPRRSA VLILFGEDPA 
HGPDVLFVER AKTLRHHPGQ PAFPGGAVDP GEGPVATALR EANEETDLDP AGVQVFGILP
DQYVFPSDFL VTPVLGWWRS PSPVRVRDVR EVASVHRIAV SELVDPANRL RVGSPSGTSS
PAFEAGPLLI WGFTAALLDG VLKAGGWELP WDTERVEPLP QEVVALAVRS RAAPGGEDK