| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8827 |
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| Symbol | |
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| ID | 8340220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10231538 |
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| End bp | 10233367 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644961917 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_003119481 |
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| Protein GI | 256397917 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACT ACAAGTCGAA CCTGCGCGAC ATCGAGTTCA ACCTCTTCGA GGTGTTCGGG
CGCGGCGAGG TCTACGGGAC CGGCGAGTAC GCCGACATGG ACGTCGACAC CGCCAAGTCG
ATCCTGGCCG AGGTGGAGCG GCTGGCCGTG GACGAGCTGG CGCCGAGCCT GCTCGACTCC
GACCGCAATC CGCCGATCTT CAACCCCGAG ACGCACTCGG CCACGCTGCC GGAGAGCTTC
AAGCGCTCCT ACAAGCAGTT CATGGACGCC GAGTGGTGGC GCCTGGGCCT GCCGACCGAG
CTGGGCGGCA CCCCGACCCC GCGCACCCTG CGCTGGTCGG TGGCCGAGCT GGTGCTCGGC
GCGAACCCGG CGATCTGGAT GTACTCCTCC GGCGCCGACT TCGCCACCGT GGTCTGGAAC
CTCGGGACCG AGGAGCAGCG CAAGGTCGCC CGCCAGATGG TCGATGGCCA GTGGGGCTCC
ACCATGGTGC TCACCGAGCC CGACGCCGGC TCCGACGTGG GCGCCGGCCG CACCAAGGCG
GTCCAGCAGG CCGACGGCTC CTGGCACATC GACGGGGTGA AGCGGTTCAT CACCTCCGGC
GAGCACGACC TGTCGGAGAA CATCATCCAC CTGGTGCTGG CCCGTCCCGA GGGCGCCGGT
CCCGGCACCA AGGGCCTGTC GCTGTTCATC GTGCCGAAGT ACGACTTCGA CTGGGAGACC
GGCGAGCTCG GCGAGCGCAA CGGCGCCTAC GTCACCAACG TCGAGCACAA GATGGGCCTG
AAGGCCTCCA CCACCTGCGA GGTCACCTTC GGCCAGAACG GCGTCCCGGC CAAGGGCTGG
CTGCTCGGCG AGGTGCACGA CGGCATCGCG CAGATGTTCA CCATCATCGA GTTCGCGCGC
ATGATGGTCG GCACCAAGGC GATCTCCACG CTGTCCACCG GCTACCTGAA CGCGCTGGAG
TACGCCAAGC AGCGCGTGCA GGGCTCGGAC CTGACCGTCC CGGGCAAGGA CGCGCCGCGC
GTCACCATCA CCCACCACCC GGACGTGCGC CGCTCGCTGA TGACGCAGAA GGCCTACGTC
GAGGGCATGC GCTCCCTGGT CCTGTACACG GCGACCCACC AGGACGCGAT CGAGCAGGCG
CGCGCCGCCG GCACCGAGGA CAAGCACGCC GAGCGCATGA ACGACCTGCT GCTGCCGATC
GTGAAGGGCT ACGGCTCGGA GAAGTCCTAC GAGCAACTCG CGCAGGCGCT GCAGATCTTC
GGCGGCTCCG GCTTCCTGCA GGAGTACCCG CTGGAGCAGT ACATCCGCGA CGCCAAGATC
GACTCGCTGT ACGAGGGCAC GACCGCGATC CAGTCCCTGG ACCTGTTCTT TCGCAAGATC
GTGAAGGACG GCGGCGTCGC GCTGACCACC CTGAACGACG AGATCGCCGC CTTCCTGGCC
GGCAACCCGG GCGGCGCGGA GCTGGCCCGC GAGCGCCAGT TGCTGTCCAC CGCGCAGGCC
GAGGTCGGCG GGATGCTCAA GGCGATGCTG GACAAGGCCG GCGAGTCGCT GTCGGACCCG
CAGCAGTTGT ACGTCGTCGC GCAGAACACC GTGCGCTTCC TGTTCGCGCT CGGCGACGTC
ATCGTCTCCT GGCTGCTGCT GCGCGGCGCG ACCGTCGCGC AGGCGGCGCT GGCCGACGGC
ACGGCCGGCC GGGACGTGCC GTTCTACACC GGCAAGGTGG CCGCGGCGAA GTTCTTCGCC
CAGAACACCC TGCCGCTGCT GGCCGCCCAG CGCGCGATCG TCGAGGCCAC TGACAATGCC
CTGATGGATG TGCCGGAGGA AGCCTTCTAA
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| Protein sequence | MSHYKSNLRD IEFNLFEVFG RGEVYGTGEY ADMDVDTAKS ILAEVERLAV DELAPSLLDS
DRNPPIFNPE THSATLPESF KRSYKQFMDA EWWRLGLPTE LGGTPTPRTL RWSVAELVLG
ANPAIWMYSS GADFATVVWN LGTEEQRKVA RQMVDGQWGS TMVLTEPDAG SDVGAGRTKA
VQQADGSWHI DGVKRFITSG EHDLSENIIH LVLARPEGAG PGTKGLSLFI VPKYDFDWET
GELGERNGAY VTNVEHKMGL KASTTCEVTF GQNGVPAKGW LLGEVHDGIA QMFTIIEFAR
MMVGTKAIST LSTGYLNALE YAKQRVQGSD LTVPGKDAPR VTITHHPDVR RSLMTQKAYV
EGMRSLVLYT ATHQDAIEQA RAAGTEDKHA ERMNDLLLPI VKGYGSEKSY EQLAQALQIF
GGSGFLQEYP LEQYIRDAKI DSLYEGTTAI QSLDLFFRKI VKDGGVALTT LNDEIAAFLA
GNPGGAELAR ERQLLSTAQA EVGGMLKAML DKAGESLSDP QQLYVVAQNT VRFLFALGDV
IVSWLLLRGA TVAQAALADG TAGRDVPFYT GKVAAAKFFA QNTLPLLAAQ RAIVEATDNA
LMDVPEEAF
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