Gene Caci_8819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8819 
Symbol 
ID8340212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10223176 
End bp10223820 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID644961909 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003119473 
Protein GI256397909 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0213904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.276407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTT TTGCCGGATA TGCTCACACC ATGACTGCGG TGGAACAGCG GCTCGGCCAC 
AAGGTCAAGA GCCTCGAACA GGAACTCAGC GGGGCCAAGG ACGCCGTGCT TCGGCCGATG
GGCGTGACGG TCCCCCAGTA CACGGCCCTG CTCGTCATCA ATGACGAGCC CGGCATCAGC
GGAGCGGAGT TGGCCCGACG TTGTCTGGTC ACCCCTCAGA CGATGACCAC GGTCCTGGGC
AACCTGACCC TCAAGGGATA CATCGAGCGC CGCTCGGTGC CCGGCCAGGG TCGTGCCATG
GAGACCACGA TCACCACGGC CGGCAAGCGG ATCCTGGCCA AGGCCGACAA GGAGGTGCTG
GCCGTCGAGA AGACACTGGC CGGCACCATG GCGGTCAAGG ACCAGGCCAC GTTCGCCAAG
CTGCTGGATC AGGCGCGCGC CCCCTTCACC AAGGAGGAGG CAGCGCCGAA GCCGGTGAAG
CGGGCGGTGC GGACCACGGC GAAGAAGACC GCGAAGAAGG CCCCGGCCAA GAAGACCGCG
GCGGCCAAGG CCGCCCCGGC CAAGAAGGCC GCTGCCAAGA AGACCGTGAA GAAGGCGGCC
GCGAAGAAGA CCGCCAAGAA GACGGCCAAG AAGACCGCGC GCTGA
 
Protein sequence
MKGFAGYAHT MTAVEQRLGH KVKSLEQELS GAKDAVLRPM GVTVPQYTAL LVINDEPGIS 
GAELARRCLV TPQTMTTVLG NLTLKGYIER RSVPGQGRAM ETTITTAGKR ILAKADKEVL
AVEKTLAGTM AVKDQATFAK LLDQARAPFT KEEAAPKPVK RAVRTTAKKT AKKAPAKKTA
AAKAAPAKKA AAKKTVKKAA AKKTAKKTAK KTAR