| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8788 |
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| Symbol | |
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| ID | 8340180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10190070 |
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| End bp | 10190621 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961879 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119444 |
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| Protein GI | 256397880 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.808008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTGATC AAGCTCGGAT CGAGGAGTTC ACCGAGTACG CGGTGGCGCG GCAGAACCAT
CTGCTGCGCA CCGCGTATCT CCTGTGCGGC GACTGGCACG GTGCGCAGGA TCTGACGCAG
ACCGCGCTGC TCAACCTGTG CAAGGCGTGG AACCGTGCCA AGCACGCGGA CTCCATCGAC
GCCTATGCGC AGAAGACGCT CATCAACGTG TTCATCCGCA GCCGGCGCAA GCTGCGGCGC
GAGAGCGAGC TGCGGGCGGC GGCGCTGTCC GGCACCGAAC GCCTCGGCGC CGGCCACGAC
CCCGACCGCC CGGAGAACCG GCTGGCGCTG CTGGCCGCCC TCGACGAGCT GTCGGAGCGG
GCCCGGGCGG TGGTGGTGCT GCGGTACTGG GAGGACCTGA GCGTGGAGGA CACCGCCGCC
GCGCTCGGCT GCTCGACCGG CAACATCAAG AGCCATGCCT CGCGAGCCCT GGCCAGGCTC
CGGGTGCTGC TCGGCGAGGA GTTCCTCGCT TACGACCGCG ACCGCGCGAC CGCGCCGAAG
GGACGGCTTT GA
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| Protein sequence | MGDQARIEEF TEYAVARQNH LLRTAYLLCG DWHGAQDLTQ TALLNLCKAW NRAKHADSID
AYAQKTLINV FIRSRRKLRR ESELRAAALS GTERLGAGHD PDRPENRLAL LAALDELSER
ARAVVVLRYW EDLSVEDTAA ALGCSTGNIK SHASRALARL RVLLGEEFLA YDRDRATAPK
GRL
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