Gene Caci_8760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8760 
Symbol 
ID8340152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10159465 
End bp10159887 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content70% 
IMG OID644961851 
Productprotein of unknown function DUF35 
Protein accessionYP_003119416 
Protein GI256397852 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.108371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAC CGCTCGTCGA CGACGACGGC GCGCCGTACT TCGCGTACGC CGCCAAGGGC 
GAACTGCGGA TGCAGGCGTG CGCGAACTGC GGCGAAGTGC TGTTCCCGCC GCGGCCGATG
TGCCCCCGGT GTCAGGGCAT GGAGTTCGCG TGGAAGCTGA TGTCGGGGCG CGGACACGTG
TGGTCCTTCG CCGTGCCGCG TCCCCCGCTG CTGCCGGACT ACGCGGCGCT GGCGCCGTAT
CCGGTGGTGG TCGTGGAGCT GGAGGAGGAC CGGCGGCTGC GGCTGGTCGG GAACCTCGTG
GCAGCCGAGG ACGCGGACAT CGACTCCGTC GACCCGGCGA CGATCGAGAT CGGGCAGCCG
GTGCGCGCGG TGTTCCGGGA GATCGAAGGG CTTTTCGTGG CGGCCTGGAC GCCGGATGAG
TGA
 
Protein sequence
MLKPLVDDDG APYFAYAAKG ELRMQACANC GEVLFPPRPM CPRCQGMEFA WKLMSGRGHV 
WSFAVPRPPL LPDYAALAPY PVVVVELEED RRLRLVGNLV AAEDADIDSV DPATIEIGQP
VRAVFREIEG LFVAAWTPDE