Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8748 |
Symbol | |
ID | 8340140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10145650 |
End bp | 10146585 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644961839 |
Product | putative cyclase |
Protein accession | YP_003119404 |
Protein GI | 256397840 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0905009 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTAC CCGACCAGTT CACCGACCTG GCCCGCCGCG TCAACAACTG GGGCCGCTGG GGTCCGCGCG ACGAACGCGG CACCCTGAAC CTGATCACCC CCGCCCGCCT CCAGCACGCG GCAACACTGA TCCGCACCGG CCGCACCATC CCCCTCGCCA TCCCCTTGGA CGAGAACGGC CCACAGATCG GCATGATCGA GGGCAGAGAC AACCCGAAGC GCACCATGAT CATGGTGAAC GCCCAAGTAA TGGGACAGGA GCACGCGTTC TGCACCTCGG ACGACCGCGT GGAGATGGGC CTGCAGGCGT GCACGCACTG GGACGCCCTG GCACACGTGT CCTACGAGGG AAGGCTCTAC AACGGCTTCG ACGCATCGCA GATCACTGAC GCCGGAGCCA CGCACTGCGG CATCGACAAG GCGGGCGCGA TCGTGGGCCG CGGGGTGCTC CTGGACGTGG CGCGAGCACT GGGGGTCTCC CGCCTCGGAG ACGCCACACG CGGACACGCC CTGACACCGG CGGACCTCGA CGCCGCGGCG GAATTCGGCA AGGTGGAGAT CCACCCCGGC GACCTCGTAC TGATCCGCAC CGGCGCCATG ACCGCCCTGA AGGCGGGCGA CAAGCTGGCG TACAGCTTCC CGACCTCAGG ACCCTCACTG CAAACCGTGC CCTGGTTCCA CACCCACGAC GTGGCAGCGG TGGCGACCGA CAACGTGGCC TTCGAGGTCT ACCCACCCGA GCGAGACGAC GCGCAGCTCC CCGTCCACCT GCTGCACCTG GTGGAGATGG GGATGCTGCA AGGACAGAAC TGGGATCTGG AGGCGCTCGC GGAGGACTGC GCGGAGGACG GGGTGTACGA GTTCTTCCTG TCGGCTTCGC CGGAGCCCTT CACGCGGGCG GTGGGGGCGC CGGTGATTCC GGTGGCGGTG AAGTAG
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Protein sequence | MPLPDQFTDL ARRVNNWGRW GPRDERGTLN LITPARLQHA ATLIRTGRTI PLAIPLDENG PQIGMIEGRD NPKRTMIMVN AQVMGQEHAF CTSDDRVEMG LQACTHWDAL AHVSYEGRLY NGFDASQITD AGATHCGIDK AGAIVGRGVL LDVARALGVS RLGDATRGHA LTPADLDAAA EFGKVEIHPG DLVLIRTGAM TALKAGDKLA YSFPTSGPSL QTVPWFHTHD VAAVATDNVA FEVYPPERDD AQLPVHLLHL VEMGMLQGQN WDLEALAEDC AEDGVYEFFL SASPEPFTRA VGAPVIPVAV K
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