Gene Caci_8748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8748 
Symbol 
ID8340140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10145650 
End bp10146585 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content68% 
IMG OID644961839 
Productputative cyclase 
Protein accessionYP_003119404 
Protein GI256397840 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0905009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTAC CCGACCAGTT CACCGACCTG GCCCGCCGCG TCAACAACTG GGGCCGCTGG 
GGTCCGCGCG ACGAACGCGG CACCCTGAAC CTGATCACCC CCGCCCGCCT CCAGCACGCG
GCAACACTGA TCCGCACCGG CCGCACCATC CCCCTCGCCA TCCCCTTGGA CGAGAACGGC
CCACAGATCG GCATGATCGA GGGCAGAGAC AACCCGAAGC GCACCATGAT CATGGTGAAC
GCCCAAGTAA TGGGACAGGA GCACGCGTTC TGCACCTCGG ACGACCGCGT GGAGATGGGC
CTGCAGGCGT GCACGCACTG GGACGCCCTG GCACACGTGT CCTACGAGGG AAGGCTCTAC
AACGGCTTCG ACGCATCGCA GATCACTGAC GCCGGAGCCA CGCACTGCGG CATCGACAAG
GCGGGCGCGA TCGTGGGCCG CGGGGTGCTC CTGGACGTGG CGCGAGCACT GGGGGTCTCC
CGCCTCGGAG ACGCCACACG CGGACACGCC CTGACACCGG CGGACCTCGA CGCCGCGGCG
GAATTCGGCA AGGTGGAGAT CCACCCCGGC GACCTCGTAC TGATCCGCAC CGGCGCCATG
ACCGCCCTGA AGGCGGGCGA CAAGCTGGCG TACAGCTTCC CGACCTCAGG ACCCTCACTG
CAAACCGTGC CCTGGTTCCA CACCCACGAC GTGGCAGCGG TGGCGACCGA CAACGTGGCC
TTCGAGGTCT ACCCACCCGA GCGAGACGAC GCGCAGCTCC CCGTCCACCT GCTGCACCTG
GTGGAGATGG GGATGCTGCA AGGACAGAAC TGGGATCTGG AGGCGCTCGC GGAGGACTGC
GCGGAGGACG GGGTGTACGA GTTCTTCCTG TCGGCTTCGC CGGAGCCCTT CACGCGGGCG
GTGGGGGCGC CGGTGATTCC GGTGGCGGTG AAGTAG
 
Protein sequence
MPLPDQFTDL ARRVNNWGRW GPRDERGTLN LITPARLQHA ATLIRTGRTI PLAIPLDENG 
PQIGMIEGRD NPKRTMIMVN AQVMGQEHAF CTSDDRVEMG LQACTHWDAL AHVSYEGRLY
NGFDASQITD AGATHCGIDK AGAIVGRGVL LDVARALGVS RLGDATRGHA LTPADLDAAA
EFGKVEIHPG DLVLIRTGAM TALKAGDKLA YSFPTSGPSL QTVPWFHTHD VAAVATDNVA
FEVYPPERDD AQLPVHLLHL VEMGMLQGQN WDLEALAEDC AEDGVYEFFL SASPEPFTRA
VGAPVIPVAV K